RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 RBP1P09455 135 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 RALBP11234 206 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ADRB3P13945 408 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 CPA3P15088 417 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 CHRM3P20309 590 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 RPS3P23396 243 aaKnown RBP eCLIP15.9■□□□□ 0.14
NUP54-214ENST00000514307 WASP42768 502 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ETV4P43268 484 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 SERPINB4P48594 390 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 PRKAA2P54646 552 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 SEC13P55735 322 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 SATB1Q01826 763 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ASPHQ12797 758 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 PDAP1Q13442 181 aaKnown RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 C2orf27AQ580R0 203 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 EOGTQ5NDL2 527 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 N4BP2L1Q5TBK1 243 aaPredicted RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 ZNF776Q68DI1 518 aaPredicted RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 PTRHD1Q6GMV3 140 aaKnown RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 PSAPL1Q6NUJ1 521 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 LIPIQ6XZB0 460 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 RGS9BPQ6ZS82 235 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 CLEC14AQ86T13 490 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 NKAPQ8N5F7 415 aaKnown RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 ARMC2Q8NEN0 867 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 RAB3IL1Q8TBN0 382 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 FAM3CQ92520 227 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ZNF75CPQ92670 426 aaPredicted RBP15.9■□□□□ 0.14
NUP54-214ENST00000514307 ARRDC3Q96B67 414 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 GRAMD1AQ96CP6 724 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 SCYL1Q96KG9 808 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 GABRG3Q99928 467 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ZSCAN5AQ9BUG6 496 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 SPATA16Q9BXB7 569 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 MANSC1Q9H8J5 431 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 ZDHHC3Q9NYG2 299 aa15.9■□□□□ 0.14
NUP54-214ENST00000514307 A0A0U1RQS6 177 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CCDC189A1A4V9 331 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 TCP11X1B4DZS4 312 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CFAP99D6REC4 459 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 E5RI56 91 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 AREL1O15033 823 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 PHGDHO43175 533 aaKnown RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 AP1G1O43747 822 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 LZTS3O60299 673 aaPredicted RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 PLIN3O60664 434 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 EGFP01133 1207 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 C1SP09871 688 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 LTA4HP09960 611 aaKnown RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 SLC35E2BP0CK96 405 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 UGT1A6P19224 532 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 UGT1A1P22309 533 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 UGT1A4P22310 534 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 FDXRP22570 491 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 LHCGRP22888 699 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ACRV1P26436 265 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 UGT1A3P35503 534 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 UGT1A5P35504 534 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 MMP12P39900 470 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 NSG1P42857 185 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 PSMD8P48556 350 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 LIG3P49916 1009 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CDKN1CP49918 316 aaPredicted RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 CSRP3P50461 194 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 SEMG2Q02383 582 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ZBTB16Q05516 673 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ACAP2Q15057 778 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CST6Q15828 149 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 POM121L1PQ3SYA9 428 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ZNF549Q6P9A3 640 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 Q6ZVL8 140 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ZNF765Q7L2R6 523 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CYP2U1Q7Z449 544 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 HSD11B1LQ7Z5J1 315 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 TECPR1Q7Z6L1 1165 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CEP97Q8IW35 865 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 NXPE1Q8N323 547 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 TRAM1L1Q8N609 369 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ACVR1CQ8NER5 493 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 PPP1R14CQ8TAE6 165 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 BCAS4Q8TDM0 211 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CXorf40AQ8TE69 158 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 DCUN1D1Q96GG9 259 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 CCT8L2Q96SF2 557 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 NDNQ99608 321 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 COPS8Q99627 209 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 MRPL57Q9BQC6 102 aaKnown RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 TSSK1BQ9BXA7 367 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.89■□□□□ 0.13
NUP54-214ENST00000514307 TMEM216Q9P0N5 145 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 GNPTGQ9UJJ9 305 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 NCKAP1Q9Y2A7 1128 aa15.89■□□□□ 0.13
NUP54-214ENST00000514307 WDR91A4D1P6 747 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 KLF8O95600 359 aaPredicted RBP15.88■□□□□ 0.13
NUP54-214ENST00000514307 FAM107AO95990 144 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 DNTTP04053 509 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 PROCP04070 461 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 ASGR2P07307 311 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 BPGMP07738 259 aa15.88■□□□□ 0.13
NUP54-214ENST00000514307 CCDC166P0CW27 439 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms