RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 TAF4O00268 1085 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 FPGTO14772 594 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 SLC31A1O15431 190 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 RECQL5O94762 991 aaPredicted RBP20.07■□□□□ 0.8
USP53-208ENST00000514305 SLU7O95391 586 aaKnown RBP20.07■□□□□ 0.8
USP53-208ENST00000514305 LDOC1O95751 146 aaPredicted RBP20.07■□□□□ 0.8
USP53-208ENST00000514305 EPHA8P29322 1005 aaPredicted RBP20.07■□□□□ 0.8
USP53-208ENST00000514305 PTSQ03393 145 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 OVGP1Q12889 678 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 SKIDA1Q1XH10 827 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 PCID2Q5JVF3 399 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 SEL1L3Q68CR1 1132 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 DUPD1Q68J44 220 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 ZNF765Q7L2R6 523 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 LYSMD3Q7Z3D4 306 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 IQCHQ86VS3 1027 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 PDIK1LQ8N165 341 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 SAP25Q8TEE9 199 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 STYXQ8WUJ0 223 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 PEX13Q92968 403 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 NUS1Q96E22 293 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 CNDP2Q96KP4 475 aaKnown RBP20.07■□□□□ 0.8
USP53-208ENST00000514305 RANBP9Q96S59 729 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 ERVMER34-1Q9H9K5 563 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 GGT7Q9UJ14 662 aa20.07■□□□□ 0.8
USP53-208ENST00000514305 GOLGA4Q13439 2230 aaKnown RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 ANKRD11Q6UB99 2663 aaPredicted RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 SDR42E2A6NKP2 422 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 SPINT1O43278 529 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 PIRTP0C851 137 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 LHCGRP22888 699 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 IVDP26440 423 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 SPINT3P49223 89 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 ITGA8P53708 1063 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 ARL4CP56559 192 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 SESN2P58004 480 aaPredicted RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 SEPT6Q14141 434 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 SMAD1Q15797 465 aaKnown RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 DMRTA1Q5VZB9 504 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 HIBCHQ6NVY1 386 aaPredicted RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 DHRS13Q6UX07 377 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 TSPAN33Q86UF1 283 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 CBARPQ8N350 705 aaPredicted RBP20.06■□□□□ 0.8
USP53-208ENST00000514305 EID2Q8N6I1 236 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 MDM1Q8TC05 714 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 DTD2Q96FN9 168 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 COQ10AQ96MF6 247 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 FOXP3Q9BZS1 431 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 TSPYL1Q9H0U9 437 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 DPH5Q9H2P9 285 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 FAM83DQ9H4H8 585 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 APPL1Q9UKG1 709 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 RIMKLBQ9ULI2 386 aa20.06■□□□□ 0.8
USP53-208ENST00000514305 SLC4A1P02730 911 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 CDK4P11802 303 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 TPH1P17752 444 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 RPL21P46778 160 aaKnown RBP20.05■□□□□ 0.8
USP53-208ENST00000514305 SEMG2Q02383 582 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 GUCY2DQ02846 1103 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 POU6F1Q14863 301 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 SHBQ15464 509 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 CDKN3Q16667 212 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 DCP2Q8IU60 420 aaKnown RBP20.05■□□□□ 0.8
USP53-208ENST00000514305 CCNJLQ8IV13 435 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 IFT20Q8IY31 132 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 NOA1Q8NC60 698 aaKnown RBP20.05■□□□□ 0.8
USP53-208ENST00000514305 LRRC39Q96DD0 335 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 SERPINB12Q96P63 405 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 PLEKHG4BQ96PX9 1271 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 NAT9Q9BTE0 207 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 MTRF1LQ9UGC7 380 aaKnown RBP20.05■□□□□ 0.8
USP53-208ENST00000514305 PCDHGA1Q9Y5H4 931 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 ADAMTS20P59510 1910 aa20.05■□□□□ 0.8
USP53-208ENST00000514305 TCRBV7S3A2A0A539 114 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 GOLGA8MH3BSY2 632 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 RFPL3O75679 317 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 TSHRP16473 764 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 PAMP19021 973 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 RXRGP48443 463 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 DCDC1P59894 354 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 SLC7A5Q01650 507 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 DPTQ07507 201 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 OLIG2Q13516 323 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 ANKRD22Q5VYY1 191 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 PDPK2PQ6A1A2 396 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 CASC4Q6P4E1 433 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 Q6ZVL8 140 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 HSD11B1LQ7Z5J1 315 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 TECPR1Q7Z6L1 1165 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 TMPRSS12Q86WS5 348 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 TTC30BQ8N4P2 665 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 DTX3LQ8TDB6 740 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 KLK6Q92876 244 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 AP2M1Q96CW1 435 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 MRM3Q9HC36 420 aaKnown RBP20.04■□□□□ 0.8
USP53-208ENST00000514305 EPB41L5Q9HCM4 733 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 IL17CQ9P0M4 197 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 NFKBIL1Q9UBC1 381 aaPredicted RBP20.04■□□□□ 0.8
USP53-208ENST00000514305 COQ6Q9Y2Z9 468 aa20.04■□□□□ 0.8
USP53-208ENST00000514305 SPO11Q9Y5K1 396 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms