RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 GPR39O43194 453 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 KERAO60938 352 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 SMIM24O75264 130 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 NIPSNAP2O75323 286 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ENO1P06733 434 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 TPBGLP0DKB5 382 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 RPS3P23396 243 aaKnown RBP eCLIP14.85□□□□□ -0.03
VCAN-211ENST00000513984 HNRNPH1P31943 449 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 PTPN5P54829 565 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 NFATC2Q13469 925 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 DUSP6Q16828 381 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ACCSLQ4AC99 568 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ZNF678Q5SXM1 525 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 FAM151BQ6UXP7 276 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 TPRG1Q6ZUI0 275 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 USP45Q70EL2 814 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 CD200R1Q8TD46 325 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 PHF21BQ96EK2 531 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 LRRC3BQ96PB8 259 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 GSTO2Q9H4Y5 243 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ZDHHC6Q9H6R6 413 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 EML4Q9HC35 981 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 IL26Q9NPH9 171 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 TCF7L2Q9NQB0 619 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ERVW-1Q9UQF0 538 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 STK38LQ9Y2H1 464 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 YBX2Q9Y2T7 364 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 CCDC189A1A4V9 331 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 PRMT5O14744 637 aaPredicted RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 MTHFD2P13995 350 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 BPIP17213 487 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 POLR2EP19388 210 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 ITGALP20701 1170 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 PPARGP37231 505 aaPredicted RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 HERVK_113P63132 956 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 DHCR24Q15392 516 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 CRTC1Q6UUV9 634 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 RINLQ6ZS11 566 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 Q6ZVU0 165 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 LONP2Q86WA8 852 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 GIMAP7Q8NHV1 300 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 STAG3L4Q8TBR4 150 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 OR52B2Q96RD2 323 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 SLC30A3Q99726 388 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 ERVK-6Q9BXR3 956 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 SHCBP1LQ9BZQ2 653 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 TAS2R1Q9NYW7 299 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 GALPQ9UBC7 116 aa14.85□□□□□ -0.03
VCAN-211ENST00000513984 TRMT6Q9UJA5 497 aaKnown RBP14.85□□□□□ -0.03
VCAN-211ENST00000513984 MUC22E2RYF6 1773 aaPredicted RBP14.84□□□□□ -0.03
VCAN-211ENST00000513984 BNIP3LO60238 219 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 TSPAN12O95859 305 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 CYP17A1P05093 508 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 HNRNPLP14866 589 aaKnown RBP eCLIP14.84□□□□□ -0.03
VCAN-211ENST00000513984 SPAM1P38567 509 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 SHHQ15465 462 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 GEN1Q17RS7 908 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 SH2D4BQ5SQS7 431 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 LYPLAL1Q5VWZ2 237 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 UGT3A1Q6NUS8 523 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 TSPAN33Q86UF1 283 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 SERPINA9Q86WD7 417 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 KIRREL3Q8IZU9 778 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 TEX9Q8N6V9 391 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 C12orf76Q8N812 135 aaPredicted RBP14.84□□□□□ -0.03
VCAN-211ENST00000513984 NAT16Q8N8M0 369 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 OR2A12Q8NGT7 310 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 FRS2Q8WU20 508 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 OSCP1Q8WVF1 389 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 RSPRY1Q96DX4 576 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 FAR2Q96K12 515 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 MRGPRX3Q96LB0 322 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 CCDC28BQ9BUN5 200 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 CADM1Q9BY67 442 aaKnown RBP14.84□□□□□ -0.03
VCAN-211ENST00000513984 ASB8Q9H765 288 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 SFXN1Q9H9B4 322 aa14.84□□□□□ -0.03
VCAN-211ENST00000513984 TRANK1O15050 2925 aa14.83□□□□□ -0.03
VCAN-211ENST00000513984 GLYATL1P3A0A0U1RQE8 302 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 AGAP14A8MT82 685 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 UBXN8O00124 270 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 TRIM24O15164 1050 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 GYG2O15488 501 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 HOXC11O43248 304 aaPredicted RBP14.83□□□□□ -0.04
VCAN-211ENST00000513984 ATP6V1G2O95670 118 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 UGT2B4P06133 528 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 ADH5P11766 374 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 ZNF7P17097 686 aaPredicted RBP14.83□□□□□ -0.04
VCAN-211ENST00000513984 CLCN7P51798 805 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 KCNC3Q14003 757 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 EML3Q32P44 896 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 GPR33Q49SQ1 333 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 UNC50Q53HI1 259 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 LRRC66Q68CR7 880 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 TMC5Q6UXY8 1006 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 CUZD1Q86UP6 607 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 RBFAQ8N0V3 343 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 SIDT2Q8NBJ9 832 aaKnown RBP14.83□□□□□ -0.04
VCAN-211ENST00000513984 CHST14Q8NCH0 376 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms