RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 OGFRQ9NZT2 677 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 CPNE7Q9UBL6 633 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 ZNHIT2Q9UHR6 403 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 ENTPD4Q9Y227 616 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 KCNK6Q9Y257 313 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 ZDHHC9Q9Y397 364 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 PCYT1BQ9Y5K3 369 aaPredicted RBP10.39□□□□□ -0.75
CLDND1-227ENST00000513452 NF1P21359 2839 aa10.39□□□□□ -0.75
CLDND1-227ENST00000513452 A0A0U1RQS6 177 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 ARHGAP42A6NI28 874 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 LILRA5A6NI73 299 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 BIN1O00499 593 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 FGF10O15520 208 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 ASMTLO95671 621 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 CYP2A6P11509 494 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 FGF5P12034 268 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 ACP5P13686 325 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 SLC2A4P14672 509 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 TYRP1P17643 537 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 PTPN4P29074 926 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 TPI1P60174 286 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 CDK18Q07002 472 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 ELOAQ14241 798 aaKnown RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 SCYL2Q6P3W7 929 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 FAM199XQ6PEV8 388 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 RFLNAQ6ZTI6 216 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 SYVN1Q86TM6 617 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 PPP1R3BQ86XI6 285 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 MCEMP1Q8IX19 187 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 RHOT1Q8IXI2 618 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 IQCKQ8N0W5 287 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 LZTR1Q8N653 840 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 RBMXL3Q8N7X1 1067 aaKnown RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 FDCSPQ8NFU4 85 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 AP2M1Q96CW1 435 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 RANBP9Q96S59 729 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 C11orf70Q9BRQ4 267 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 NUDT9Q9BW91 350 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 SLC39A8Q9C0K1 460 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 AKIRIN1Q9H9L7 192 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 G3BP2Q9UN86 482 aaKnown RBP10.38□□□□□ -0.75
CLDND1-227ENST00000513452 PCDHGC4Q9Y5F7 938 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 CROCCQ5TZA2 2017 aa10.38□□□□□ -0.75
CLDND1-227ENST00000513452 KIR2DS5A0A0G2JLQ3 304 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 A0A0G2JNG1 304 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 A6NL46 340 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 KIR2DS3K7RE56 304 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 PSMD11O00231 422 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 DFFAO00273 331 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 HTRA2O43464 458 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 KIF1CO43896 1103 aaKnown RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 CEACAM4O75871 244 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 UBXN7O94888 489 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 ATP1A1P05023 1023 aaKnown RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 F3P13726 295 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 GPD1P21695 349 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 MMP8P22894 467 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 RFC1P35251 1148 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 ITGA1P56199 1179 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 RPS15P62841 145 aaKnown RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 DPTQ07507 201 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 NSUN2Q08J23 767 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 KIR2DS5Q14953 304 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 PWWP2BQ6NUJ5 590 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 ARHGAP36Q6ZRI8 547 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 HPS6Q86YV9 775 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 CBARPQ8N350 705 aaPredicted RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 CISD2Q8N5K1 135 aaKnown RBP10.37□□□□□ -0.75
CLDND1-227ENST00000513452 SPOCK2Q92563 424 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 SCAMP4Q969E2 229 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 GPR87Q9BY21 358 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 ABCG8Q9H221 673 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 KIAA1468Q9P260 1216 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 FZD10Q9ULW2 581 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 PHTF1Q9UMS5 762 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 FHOD1Q9Y613 1164 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 CELSR1Q9NYQ6 3014 aa10.37□□□□□ -0.75
CLDND1-227ENST00000513452 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-227ENST00000513452 GOLGA6L4A6NEF3 574 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 ZNF185O15231 689 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 TOX3O15405 576 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-227ENST00000513452 CCP110O43303 1012 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 DNAJC6O75061 913 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 SOCS5O75159 536 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 KRT3P12035 628 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 AMD1P17707 334 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 CTPS1P17812 591 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
CLDND1-227ENST00000513452 TRAF2Q12933 501 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 TUBB3Q13509 450 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 RAPSNQ13702 412 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 RFTN1Q14699 578 aaPredicted RBP10.36□□□□□ -0.75
CLDND1-227ENST00000513452 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 CACHD1Q5VU97 1274 aa10.36□□□□□ -0.75
CLDND1-227ENST00000513452 FAM92BQ6ZTR7 304 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms