RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PRR23D1E9PI22 279 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 TMX2-CTNND1H3BSU7 103 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 HNRNPDLO14979 420 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 COCHO43405 550 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 CSO75390 466 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ERN1O75460 977 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 TCEA3O75764 348 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PRKD3O94806 890 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PENKP01210 267 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 THEGLP0DJG4 465 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PRR23D2P0DMB1 279 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ENPP1P22413 925 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 BDNFP23560 247 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ATP5C1P36542 298 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 CCT6AP40227 531 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 LIG4P49917 911 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 MFAP3P55082 362 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 MANFP55145 182 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 NXPH1P58417 271 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 CLRN1P58418 232 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 KRT85P78386 507 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 RBP5P82980 135 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 IL9RQ01113 521 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ITKQ08881 620 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 EIF3IQ13347 325 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 KLF1Q13351 362 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF234Q14588 700 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 POSTNQ15063 836 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 SOWAHAQ2M3V2 549 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ZSCAN23Q3MJ62 389 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 TTC31Q49AM3 519 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PRAMEF14Q5SWL7 426 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ATXN7L2Q5T6C5 722 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 RUFY3Q7L099 469 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 GLB1L2Q8IW92 636 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 SLC25A45Q8N413 288 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 CNTD1Q8N815 330 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 SEMA6DQ8NFY4 1073 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 OR4C6Q8NH72 309 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF564Q8TBZ8 553 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 NACC2Q96BF6 587 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 BICD1Q96G01 975 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PRR11Q96HE9 360 aaPredicted RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 JAKMIP1Q96N16 626 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 AIFM3Q96NN9 605 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 TRIM9Q9C026 710 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 LHX5Q9H2C1 402 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 DDX19AQ9NUU7 478 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 DDX56Q9NY93 547 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 LSM7Q9UK45 103 aaKnown RBP3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PLA2G4CQ9UP65 541 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 PCDHGA7Q9Y5G6 932 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 STYXL1Q9Y6J8 313 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 SLCO1B1Q9Y6L6 691 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 NUMA1Q14980 2115 aa3.79□□□□□ -1.8
PDLIM5-218ENST00000513341 CELSR2Q9HCU4 2923 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PLXNA2O75051 1894 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 E9PMD0 336 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 F8VP50 259 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 NVLO15381 856 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 INSIG1O15503 277 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 EPB41L2O43491 1005 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 RNASEH1O60930 286 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ITGA10O75578 1167 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 DDAH2O95865 285 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 LDHAP00338 332 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 WNT1P04628 370 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ITGA2BP08514 1039 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 PDGFRBP09619 1106 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ALPPL2P10696 532 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 KRT10P13645 584 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 CPA1P15085 419 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ACAT1P24752 427 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 LMO2P25791 158 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 CRHR1P34998 444 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ACOT2P49753 483 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 VAV2P52735 878 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 GALCP54803 685 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 RPS14P62263 151 aaKnown RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 GTF2BQ00403 316 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 CYP2A13Q16696 494 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 UGT8Q16880 541 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 KRT79Q5XKE5 535 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ZNF626Q68DY1 528 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ADALQ6DHV7 355 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SERPINA13PQ6UXR4 307 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 TPGS1Q6ZTW0 290 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 LHFPL2Q6ZUX7 228 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ANKS1BQ7Z6G8 1248 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 C14orf80Q86SX3 495 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 ADGRF2Q8IZF7 708 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 CSGALNACT2Q8N6G5 542 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SYT2Q8N9I0 419 aaPredicted RBP3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 KDM1BQ8NB78 822 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 OR2T34Q8NGX1 318 aa3.78□□□□□ -1.8
PDLIM5-218ENST00000513341 SNX33Q8WV41 574 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms