RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 H0Y8X5 98 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 RAD51BO15315 384 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 USP1O94782 785 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PRAMEF1O95521 474 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TTC4O95801 387 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 SOD1P00441 154 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 LMNAP02545 664 aaKnown RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PAMP19021 973 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 ITGALP20701 1170 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TRIM23P36406 574 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MPLP40238 635 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 THOP1P52888 689 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CLDN2P57739 230 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PFN3P60673 137 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 YPEL5P62699 121 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PRAMEP78395 509 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PDIA2Q13087 525 aaKnown RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CBLBQ13191 982 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 HLTFQ14527 1009 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PTPRCAPQ14761 206 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TEAD4Q15561 434 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 DUOXA1Q1HG43 343 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 BBS9Q3SYG4 887 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 LINC01559Q495D7 138 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 FNBP1LQ5T0N5 605 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 ALS2CLQ60I27 953 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 KIAA0930Q6ICG6 404 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PNCKQ6P2M8 343 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM151BQ6UXP7 276 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 RFLNAQ6ZTI6 216 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CEP128Q6ZU80 1094 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PTAR1Q7Z6K3 402 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TMEM135Q86UB9 458 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 HEATR4Q86WZ0 1026 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CCNJLQ8IV13 435 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 IFT20Q8IY31 132 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MPP5Q8N3R9 675 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 OR13J1Q8NGT2 312 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PIGKQ92643 395 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 ZNF669Q96BR6 464 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 STAMBPL1Q96FJ0 436 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CDKN2AIPNLQ96HQ2 116 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 SIGLEC10Q96LC7 697 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 ZNF778Q96MU6 729 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 VPS35Q96QK1 796 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 FMO2Q99518 471 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 SPATA16Q9BXB7 569 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TSPYL1Q9H0U9 437 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 WDR26Q9H7D7 661 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 BPIFA1Q9NP55 256 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 GDF3Q9NR23 364 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MBNL1Q9NR56 388 aaKnown RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 CHRAC1Q9NRG0 131 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 PHPT1Q9NRX4 125 aaPredicted RBP7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 GPR27Q9NS67 375 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TREX1Q9NSU2 369 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 ZDHHC18Q9NUE0 388 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TMEM74BQ9NUR3 256 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 KCTD3Q9Y597 815 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MAD1L1Q9Y6D9 718 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 TEX264Q9Y6I9 313 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 SLCO1B1Q9Y6L6 691 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 RPS6KL1Q9Y6S9 549 aa7.54□□□□□ -1.2
HMGXB3-204ENST00000513318 MYO15AQ9UKN7 3530 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 LAMA1P25391 3075 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 RIF1Q5UIP0 2472 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 A0A1W2PR77 199 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 CCDC78A2IDD5 438 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PCNX2A6NKB5 2137 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 AGAP14A8MT82 685 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 FADS2P1A8MWK0 482 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PROB1E7EW31 1015 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 K7ESM1 405 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 CACNB4O00305 520 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 GAPDHSO14556 408 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 VILLO15195 856 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 LRP3O75074 770 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 BANF1O75531 89 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SRP72O76094 671 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 POLBP06746 335 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 RETP07949 1114 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 HOXC4P09017 264 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 THEGLP0DJG4 465 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 MYCLP1P12525 358 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PGAM1P18669 254 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 KELP23276 732 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 HTR1BP28222 390 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 NMBRP28336 390 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 TNFRSF8P28908 595 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 MC4RP32245 332 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ELK3P41970 407 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ARSDP51689 593 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 KIAA1024LP59773 190 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SH3BP2P78314 561 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 TMPRSS15P98073 1019 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 XIAPP98170 497 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms