RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 OR1J2Q8NGS2 313 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 GOT1L1Q8NHS2 421 aaPredicted RBP4.7□□□□□ -1.66
MBD4-209ENST00000511009 SETD6Q8TBK2 473 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 HM13Q8TCT9 377 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 DPF1Q92782 380 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 HDAC11Q96DB2 347 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 CFAP57Q96MR6 1250 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 SPAG5Q96R06 1193 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 DDOQ99489 341 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 NAA11Q9BSU3 229 aaPredicted RBP4.7□□□□□ -1.66
MBD4-209ENST00000511009 TRMOQ9BU70 441 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 ISCUQ9H1K1 167 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 R3HDMLQ9H3Y0 253 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 ESRP2Q9H6T0 727 aaKnown RBP4.7□□□□□ -1.66
MBD4-209ENST00000511009 MAGIXQ9H6Y5 334 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 CATSPERBQ9H7T0 1116 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 NRIP3Q9NQ35 241 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 TAS2R14Q9NYV8 317 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 FLRT1Q9NZU1 646 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 SLC9A2Q9UBY0 812 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 ZNF112Q9UJU3 913 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 BTBD3Q9Y2F9 522 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 PCDHGA5Q9Y5G8 931 aa4.7□□□□□ -1.66
MBD4-209ENST00000511009 COL11A2P13942 1736 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 ARHGEF40Q8TER5 1519 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 A0A0U1RQG5 324 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 EIF4E1BA6NMX2 242 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 E5RJQ4 531 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 ATG13O75143 517 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 CNOT3O75175 753 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 SLU7O95391 586 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 TRUB2O95900 331 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 IFNAR1P17181 557 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 SP100P23497 879 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 PTAFRP25105 342 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 ME1P48163 572 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 SELENOVP59797 346 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 PPP2R2BQ00005 443 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 NHLH1Q02575 133 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 RALGDSQ12967 914 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 MAD2L1Q13257 205 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 LAMB3Q13751 1172 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 MYBPC2Q14324 1141 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 GPR18Q14330 331 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 WASHC2DQ5SRD0 308 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 DCST1Q5T197 706 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 ARMC4Q5T2S8 1044 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 C6orf163Q5TEZ5 329 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 B3GNT6Q6ZMB0 384 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 LDB1Q86U70 411 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 IQCA1Q86XH1 822 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 APOLD1Q96LR9 279 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 FER1L6-AS2Q96M78 137 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 CITED2Q99967 270 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 PRSS22Q9GZN4 317 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 TMEM39BQ9GZU3 492 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 SLCO5A1Q9H2Y9 848 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 GOLPH3LQ9H4A5 285 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 CLK4Q9HAZ1 481 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 LARSQ9P2J5 1176 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 CRNNQ9UBG3 495 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 DDX25Q9UHL0 483 aaKnown RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 TUBE1Q9UJT0 475 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 PCDHA12Q9UN75 941 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 CDC14AQ9UNH5 594 aa4.69□□□□□ -1.66
MBD4-209ENST00000511009 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.69□□□□□ -1.66
MBD4-209ENST00000511009 TMEM272A0A1B0GTI8 110 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 EDDM13A0A1B0GTR0 161 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 ARHGEF37A1IGU5 675 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 WDR46O15213 610 aaKnown RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 LDB2O43679 373 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 NDUFB8O95169 186 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 KCNK5O95279 499 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 CYP1A2P05177 515 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 PRLRP16471 622 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 MCCP23508 829 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 RPL3P39023 403 aaKnown RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 GP5P40197 560 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 CCR10P46092 362 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 RASSF2P50749 326 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 CSNK2A1P68400 391 aaPredicted RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 SIRPAP78324 504 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 ADORA2A-AS1P86434 159 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 FOXM1Q08050 763 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 ZNF284Q2VY69 593 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 CBWD6Q4V339 395 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 FAM98BQ52LJ0 330 aaKnown RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 CBWD3Q5JTY5 395 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 MANEAQ5SRI9 462 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 KRT39Q6A163 491 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 TMEM211Q6ICI0 200 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 KCTD18Q6PI47 426 aaPredicted RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 DCLRE1AQ6PJP8 1040 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 SLC2A7Q6PXP3 512 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 INTS8Q75QN2 995 aaKnown RBP4.68□□□□□ -1.66
MBD4-209ENST00000511009 SNX32Q86XE0 403 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 FBXO39Q8N4B4 442 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 TTC30BQ8N4P2 665 aa4.68□□□□□ -1.66
MBD4-209ENST00000511009 AFAP1Q8N556 730 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms