RNA–Protein interactions for RNA: ENST00000509644.5

MATR3-236, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-236ENST00000509644 LRRC53A6NM62 1247 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 FADS2P1A8MWK0 482 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 H3BRJ5 948 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 ATP1A1P05023 1023 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 TPM2P07951 284 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 FURINP09958 794 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 RARAP10276 462 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 ZNF28P17035 718 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 ZNF30P17039 623 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 PRKCIP41743 596 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 EPHA4P54764 986 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 CDH6P55285 790 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 UBE2IP63279 158 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 MYL5Q02045 173 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 SLC25A11Q02978 314 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 HHEXQ03014 270 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 HENMT1Q5T8I9 393 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 MARC1Q5VT66 337 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 PPP1R2P3Q6NXS1 205 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 TMCO3Q6UWJ1 677 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 CEACAM20Q6UY09 585 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 GALNT13Q8IUC8 556 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 RAVER1Q8IY67 606 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 NRSN1Q8IZ57 195 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 PAF1Q8N7H5 531 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 OR10G6Q8NH81 332 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 EXD1Q8NHP7 514 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 APOBEC4Q8WW27 367 aaKnown RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 MAML1Q92585 1016 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 EID2BQ96D98 161 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
MATR3-236ENST00000509644 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 ZPBPQ9BS86 351 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 TBC1D10AQ9BXI6 508 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 HAUS4Q9H6D7 363 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 NT5MQ9NPB1 228 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 AIPL1Q9NZN9 384 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 KCNMB2Q9Y691 235 aa12.8□□□□□ -0.36
MATR3-236ENST00000509644 HIVEP3Q5T1R4 2406 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 INPP4BO15327 924 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 CLDN7O95471 211 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 C9P02748 559 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 DESP17661 470 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 NR1D1P20393 614 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 ARSEP51690 589 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 GFERP55789 205 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 NIPAL4Q0D2K0 466 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 NFATC2Q13469 925 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 BIRC2Q13490 618 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 MAP7Q14244 749 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 BOLA3Q53S33 107 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 SNAP47Q5SQN1 464 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 ATPAF2Q8N5M1 289 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 NCSTNQ92542 709 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 TDRD1Q9BXT4 1180 aaKnown RBP12.79□□□□□ -0.36
MATR3-236ENST00000509644 ISCUQ9H1K1 167 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.79□□□□□ -0.36
MATR3-236ENST00000509644 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
MATR3-236ENST00000509644 KCNK6Q9Y257 313 aa12.79□□□□□ -0.36
MATR3-236ENST00000509644 CREBBPQ92793 2442 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 GOLGA6L3A6NEY3 463 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 LILRA5A6NI73 299 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 MFSD11O43934 449 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 NTRK1P04629 796 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 PYGLP06737 847 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 MMP2P08253 660 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 CD48P09326 243 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 CCDC172P0C7W6 258 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 F3P13726 295 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 NFKBIAP25963 317 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 ARL4AP40617 200 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 CLCNKAP51800 687 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 DSC2Q02487 901 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 GALNT2Q10471 571 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 LACTB2Q53H82 288 aaPredicted RBP12.78□□□□□ -0.36
MATR3-236ENST00000509644 CHST15Q7LFX5 561 aaPredicted RBP12.78□□□□□ -0.36
MATR3-236ENST00000509644 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 NIPA2Q8N8Q9 360 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 TEKT4Q8WW24 435 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 HSPH1Q92598 858 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 FATE1Q969F0 183 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 ZNF653Q96CK0 615 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 AHCYL2Q96HN2 611 aaKnown RBP12.78□□□□□ -0.36
MATR3-236ENST00000509644 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
MATR3-236ENST00000509644 RTN4Q9NQC3 1192 aaKnown RBP12.78□□□□□ -0.36
MATR3-236ENST00000509644 DTLQ9NZJ0 730 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 CPNE7Q9UBL6 633 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 ZNHIT2Q9UHR6 403 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 CHKBQ9Y259 395 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 TP53TG5Q9Y2B4 290 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 SLC30A1Q9Y6M5 507 aa12.78□□□□□ -0.36
MATR3-236ENST00000509644 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.36
MATR3-236ENST00000509644 POLR1CO15160 346 aaPredicted RBP12.77□□□□□ -0.37
MATR3-236ENST00000509644 MTSS1O43312 755 aa12.77□□□□□ -0.37
MATR3-236ENST00000509644 NUAK1O60285 661 aa12.77□□□□□ -0.37
MATR3-236ENST00000509644 PDGFAP04085 211 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms