RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MYCLP1P12525 358 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF30P17039 623 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TCP1P17987 556 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TNNT3P45378 269 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 GNPDA1P46926 289 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 STC1P52823 247 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 RPL26P61254 145 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 CDK18Q07002 472 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 C2orf54Q08AI8 447 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 BIRC2Q13490 618 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 CAMK2BQ13554 666 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC1A5Q15758 541 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 P3H1Q32P28 736 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC70Q6NSX1 233 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 DOK6Q6PKX4 331 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 LVRNQ6Q4G3 990 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 LYSMD3Q7Z3D4 306 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF572Q7Z3I7 529 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 HEATR4Q86WZ0 1026 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC35F3Q8IY50 421 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 SDR16C5Q8N3Y7 309 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC25A41Q8N5S1 370 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 ARL10Q8N8L6 244 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 FAM46DQ8NEK8 389 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 CCHCR1Q8TD31 782 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 OR1E3Q8WZA6 343 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 MAGOHBQ96A72 148 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 AP2M1Q96CW1 435 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 DTD2Q96FN9 168 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 DCBLD2Q96PD2 775 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 LYSMD1Q96S90 227 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 VAT1Q99536 393 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TRIM51Q9BSJ1 452 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 BOCQ9BWV1 1114 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 LGR4Q9BXB1 951 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 DPEP2Q9H4A9 486 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 FGF22Q9HCT0 170 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 FAM153AQ9UHL3 310 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TRHDEQ9UKU6 1024 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 TMPRSS11EQ9UL52 423 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 RPL26L1Q9UNX3 145 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 SHOC2Q9UQ13 582 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF148Q9UQR1 794 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 RAXQ9Y2V3 346 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 DGKBQ9Y6T7 804 aa8.7□□□□□ -1.02
PDLIM5-213ENST00000509357 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 COL5A1P20908 1838 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 LY6G6EA0A0G2JKS1 128 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 C1orf232A0A0U1RR37 186 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 PRSS38A1L453 326 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 EME2A4GXA9 379 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 B4DGG1 531 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TAF4O00268 1085 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 MTSS1O43312 755 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 BUD23O43709 281 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CSO75390 466 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 ASMTLO95671 621 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 NDST3O95803 873 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 SLC4A1P02730 911 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 FUCA1P04066 466 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CASQ1P31415 396 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TRIM23P36406 574 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CETN2P41208 172 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 VPS41P49754 854 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TERF1P54274 439 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CDK3Q00526 305 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 ILF3Q12906 894 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 SEMA5AQ13591 1074 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 KCNJ11Q14654 390 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TRADDQ15628 312 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 PARP6Q2NL67 630 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC137Q6PK04 289 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 C19orf48Q6RUI8 117 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 MARK2Q7KZI7 788 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 DCBLD1Q8N8Z6 715 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 Q8N9G6 341 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 KYQ8NBH2 561 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 HNRNPLLQ8WVV9 542 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 SCAMP4Q969E2 229 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 CCDC3Q9BQI4 270 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 WDR83Q9BRX9 315 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TRIM56Q9BRZ2 755 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TEX101Q9BY14 249 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 FRMD8P1Q9BZ68 369 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 NRSN2Q9GZP1 204 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 TMEM168Q9H0V1 697 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 ABCG8Q9H221 673 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 ZNF711Q9Y462 761 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 GPSM3Q9Y4H4 160 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 PCDHB1Q9Y5F3 818 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 U3KQA8 63 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 ZFC3H1O60293 1989 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 KNTC1P50748 2209 aa8.69□□□□□ -1.02
PDLIM5-213ENST00000509357 COL27A1Q8IZC6 1860 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-213ENST00000509357 FADS2P1A8MWK0 482 aa8.68□□□□□ -1.02
PDLIM5-213ENST00000509357 BHMG1C9JSJ3 638 aaPredicted RBP8.68□□□□□ -1.02
PDLIM5-213ENST00000509357 CCL22O00626 93 aa8.68□□□□□ -1.02
PDLIM5-213ENST00000509357 INPP4BO15327 924 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms