RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ANKRD20A1Q5TYW2 823 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ANKRD20A3Q5VUR7 823 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 DENND2CQ68D51 928 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ERAP2Q6P179 960 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF534Q76KX8 674 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 DGLUCYQ7Z3D6 616 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 PARGQ86W56 976 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 NRROSQ86YC3 692 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SYCE1Q8N0S2 351 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 RASGEF1CQ8N431 466 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 PNPLA1Q8N8W4 532 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 FAM71DQ8N9W8 422 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 GPR26Q8NDV2 337 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 IPMKQ8NFU5 416 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 RNF217Q8TC41 542 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 NAT14Q8WUY8 206 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TSACCQ96A04 125 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 IFT43Q96FT9 208 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 KLHDC7BQ96G42 594 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 COX14Q96I36 57 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 FEM1CQ96JP0 617 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 FRMD6Q96NE9 622 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 INSM2Q96T92 566 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TMEM121Q9BTD3 319 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 APOOQ9BUR5 198 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 RIOK2Q9BVS4 552 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TEX101Q9BY14 249 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TGIF2Q9GZN2 237 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 ARFGAP3Q9NP61 516 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 PIH1D1Q9NWS0 290 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TRMT1Q9NXH9 659 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 NFKBIL1Q9UBC1 381 aaPredicted RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 RSPH14Q9UHP6 348 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TPX2Q9ULW0 747 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 SHOC2Q9UQ13 582 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 PLEKHM1Q9Y4G2 1056 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 KCTD3Q9Y597 815 aa7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 TDRD6O60522 2096 aaKnown RBP7.18□□□□□ -1.26
TOPBP1-207ENST00000509162 LOC400499M0QZD8 3231 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 MAP1BP46821 2468 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 C1orf232A0A0U1RR37 186 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 TCRBV7S3A2A0A539 114 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 C5orf60A6NFR6 353 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 PRR19A6NJB7 356 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 GOLGA6L6A8MZA4 724 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ANKRD66B4E2M5 251 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 PSMD11O00231 422 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 CCL22O00626 93 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 FPGTO14772 594 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 FFAR2O15552 330 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 SIGLEC6O43699 453 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 KRT86O43790 486 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 NDST3O95803 873 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 EML2O95834 649 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 AGTP01019 485 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 CSF2P04141 144 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 CEACAM5P06731 702 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 FTH1P19P0C7X4 201 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 PRSS56P0CW18 603 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 XPAP23025 273 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 KCNJ1P48048 391 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 POLD2P49005 469 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 SPINT3P49223 89 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF140P52738 457 aaPredicted RBP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 PDX1P52945 283 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 RPL26P61254 145 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 OVGP1Q12889 678 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 STAT4Q14765 748 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ACOX1Q15067 660 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 RPS6KA1Q15418 735 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC1A5Q15758 541 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ALS2CLQ60I27 953 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 IL27RAQ6UWB1 636 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 USP45Q70EL2 814 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ZNF765Q7L2R6 523 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 TMC3Q7Z5M5 1100 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 GLRX5Q86SX6 157 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ZSCAN30Q86W11 494 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 AGGF1Q8N302 714 aaeCLIP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 BBS5Q8N3I7 341 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 SLC25A41Q8N5S1 370 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 EID2Q8N6I1 236 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 UBL4BQ8N7F7 174 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 KYQ8NBH2 561 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 NSMCE1Q8WV22 266 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 PHACTR1Q9C0D0 580 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 FAM153AQ9UHL3 310 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 RPL26L1Q9UNX3 145 aaKnown RBP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 NEU2Q9Y3R4 380 aa7.17□□□□□ -1.26
TOPBP1-207ENST00000509162 ACACBO00763 2458 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 A0A1W2PNU3 283 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 PMS2P1A4D2B8 440 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 PDE2AO00408 941 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 INPP4BO15327 924 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 FLRT2O43155 660 aa7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 HYAL3O43820 417 aaPredicted RBP7.16□□□□□ -1.26
TOPBP1-207ENST00000509162 DNAJC6O75061 913 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms