RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 AVL9Q8NBF6 648 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 COX14Q96I36 57 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-211ENST00000508546 HERPUD2Q9BSE4 406 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 CNPY3Q9BT09 278 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-211ENST00000508546 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 TMEM98Q9Y2Y6 226 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 PCDHGC4Q9Y5F7 938 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 PCDHGA9Q9Y5G4 932 aaKnown RBP9.31□□□□□ -0.92
NEDD9-211ENST00000508546 OAS3Q9Y6K5 1087 aaKnown RBP9.31□□□□□ -0.92
NEDD9-211ENST00000508546 POLEQ07864 2286 aa9.31□□□□□ -0.92
NEDD9-211ENST00000508546 ANKHD1Q8IWZ3 2542 aaKnown RBP9.31□□□□□ -0.92
NEDD9-211ENST00000508546 KIR2DS5A0A0G2JLQ3 304 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 A0A0G2JNG1 304 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 CDC14CA4D256 554 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 ANKRD62A6NC57 917 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 A6NCN8 305 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 LILRA5A6NI73 299 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 OR5K4A6NMS3 321 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 KIR2DS3K7RE56 304 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 EEF2KO00418 725 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 TOX3O15405 576 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 DNAJC6O75061 913 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 KATNA1O75449 491 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 SORBS2O94875 1100 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 LDLRP01130 860 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 SPTBP11277 2137 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 SOX5P35711 763 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 RPL7AP62424 266 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 FOXM1Q08050 763 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 NFATC2Q13469 925 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 KIR2DS5Q14953 304 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 RALGPS1Q5JS13 557 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 PPP1R15BQ5SWA1 713 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 ARHGAP36Q6ZRI8 547 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 USP45Q70EL2 814 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 MON1BQ7L1V2 547 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 TMEM135Q86UB9 458 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 TSPAN33Q86UF1 283 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 GALNT6Q8NCL4 622 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 AP2M1Q96CW1 435 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 STAMBPL1Q96FJ0 436 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 C9orf72Q96LT7 481 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 NUDCD1Q96RS6 583 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 PCDHB18PQ96TA0 734 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 TWSG1Q9GZX9 223 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 GANQ9H2C0 597 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 UCK1Q9HA47 277 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 MLXIPLQ9NP71 852 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 VPS18Q9P253 973 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 CNOT8Q9UFF9 292 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 TBC1D29Q9UFV1 150 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 KLHL3Q9UH77 587 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 ERRFI1Q9UJM3 462 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 AP4E1Q9UPM8 1137 aa9.3□□□□□ -0.92
NEDD9-211ENST00000508546 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
NEDD9-211ENST00000508546 CROCCQ5TZA2 2017 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PIKFYVEQ9Y2I7 2098 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TTC24A2A3L6 582 aaPredicted RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PIPSLA2A3N6 862 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 C21orf140B9A014 251 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 DFFAO00273 331 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PES1O00541 588 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 KIAA0754O94854 1291 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 NDUFA10O95299 355 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PGLSO95336 258 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MT-ND3P03897 115 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 F3P13726 295 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 ZNF30P17039 623 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 DESP17661 470 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 ERCC2P18074 760 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 GARSP41250 739 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MAPK9P45984 424 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PGDP52209 483 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 JAM2P57087 298 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TRAF2Q12933 501 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MRPL49Q13405 166 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 DNASE1L3Q13609 305 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 ZNF235Q14590 738 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 CLEC16AQ2KHT3 1053 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 NADK2Q4G0N4 442 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PAPD7Q5XG87 772 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 RFX8Q6ZV50 586 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 MARK2Q7KZI7 788 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 TRIM74Q86UV6 250 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 RAVER1Q8IY67 606 aaKnown RBP9.29□□□□□ -0.92
NEDD9-211ENST00000508546 PGBD5Q8N414 524 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 NPWQ8N729 165 aa9.29□□□□□ -0.92
NEDD9-211ENST00000508546 EXD1Q8NHP7 514 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms