RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZC3H11AO75152 810 aaKnown RBP eCLIP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CDH16O75309 829 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PMPCBO75439 489 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MOCS3O95396 460 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 DEXIO95424 95 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 LDHAP00338 332 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TFRCP02786 760 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MMP1P03956 469 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OCM2P0CE71 109 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OCMP0CE72 109 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 GSTT2P0CG29 244 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 GSTT2BP0CG30 244 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PRF1P14222 555 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CA8P35219 290 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 LONP1P36776 959 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MTIF2P46199 727 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 BCAP31P51572 246 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ARFIP2P53365 341 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 LINC00205P59089 165 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PTENP60484 403 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 SUMO2P61956 95 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CDK18Q07002 472 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 LMAN2Q12907 356 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CALCOCO2Q13137 446 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TRPC3Q13507 836 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 NR1D2Q14995 579 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PKN2Q16513 984 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 KYNUQ16719 465 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RGS21Q2M5E4 152 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MMEL1Q495T6 779 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 KLHL22Q53GT1 634 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 HSP90AA4PQ58FG1 418 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TMEM63BQ5T3F8 832 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RUSC1-AS1Q66K80 236 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ARL6IP4Q66PJ3 421 aaKnown RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RGMBQ6NW40 437 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 KLHL35Q6PF15 583 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 IZUMO2Q6UXV1 221 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 USP50Q70EL3 339 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 HAUS6Q7Z4H7 955 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 DENND1CQ8IV53 801 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ADSSL1Q8N142 457 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ICA1LQ8NDH6 482 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OR6B3Q8NGW1 331 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OR6Y1Q8NGX8 325 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ANGPTL6Q8NI99 470 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PPP1R35Q8TAP8 253 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OSR1Q8TAX0 266 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MORC4Q8TE76 937 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 UCMAQ8WVF2 138 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 KBTBD7Q8WVZ9 684 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RSPRY1Q96DX4 576 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CEP19Q96LK0 163 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PRICKLE1Q96MT3 831 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 SLC39A3Q9BRY0 314 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ERP44Q9BS26 406 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 BRIP1Q9BX63 1249 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 OSBPL8Q9BZF1 889 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ZCWPW1Q9H0M4 648 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 NT5C3AQ9H0P0 336 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 GBA3Q9H227 469 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TPK1Q9H3S4 243 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 DENND2DQ9H6A0 471 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RPAP3Q9H6T3 665 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 GPR108Q9NPR9 543 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TCP11L1Q9NUJ3 509 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ZSCAN32Q9NX65 697 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 SAGE1Q9NXZ1 904 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 HOXC10Q9NYD6 342 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 HACD3Q9P035 362 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 IGSF9Q9P2J2 1179 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RABL2AQ9UBK7 228 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 GABBR1Q9UBS5 961 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 NKX1-2Q9UD57 310 aaPredicted RBP4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIM10Q9UDY6 481 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 PCSK1NQ9UHG2 260 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 NARFQ9UHQ1 456 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 LGALS13Q9UHV8 139 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF580Q9UK33 172 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CCPG1Q9ULG6 757 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 RAB26Q9ULW5 256 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 EXOC7Q9UPT5 735 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 AP4S1Q9Y587 144 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 N6AMT1Q9Y5N5 214 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 UTYO14607 1347 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 MON2Q7Z3U7 1717 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 CEP290O15078 2479 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 ADAMTSL1Q8N6G6 1762 aa4.63□□□□□ -1.67
PDLIM5-211ENST00000508531 AFDNP55196 1824 aaKnown RBP4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 KIAA0100Q14667 2235 aaKnown RBP4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 FER1L6Q2WGJ9 1857 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 A0A0U1RQJ8 604 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 A0A1W2PPL8 197 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 TMEM120BA0PK00 339 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 FUOMA2VDF0 154 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 FAM47DPA6NHR8 397 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 A8MUI8 341 aa4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 MIF4GDA9UHW6 222 aaKnown RBP4.62□□□□□ -1.67
PDLIM5-211ENST00000508531 H0Y3Z8 333 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms