RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 KCNG4Q8TDN1 519 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 MAP7D2Q96T17 732 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 DLGAP2Q9P1A6 1054 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 TAAR2Q9P1P5 351 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 KLHL20Q9Y2M5 609 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 TMEM98Q9Y2Y6 226 aa4.84□□□□□ -1.63
DHFR-204ENST00000508282 C1orf226A1L170 272 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 PRSS47A8MTI9 375 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 WDR1O75083 606 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ANOS1P23352 680 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 PBX3P40426 434 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 CCR9P51686 369 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 CLDN20P56880 219 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 DMP1Q13316 513 aaPredicted RBP4.83□□□□□ -1.64
DHFR-204ENST00000508282 RBM39Q14498 530 aaKnown RBP4.83□□□□□ -1.64
DHFR-204ENST00000508282 C18orf63Q68DL7 685 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ZNF449Q6P9G9 518 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 RAD9BQ6WBX8 426 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ZNF852Q6ZMS4 543 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 MMS22LQ6ZRQ5 1243 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 TICAM2Q86XR7 235 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ZBTB8BQ8NAP8 495 aaPredicted RBP4.83□□□□□ -1.64
DHFR-204ENST00000508282 SLC24A4Q8NFF2 622 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 SLC38A5Q8WUX1 472 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 RFFLQ8WZ73 363 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 SMARCE1Q969G3 411 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 FAM149B1Q96BN6 582 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 EVI5LQ96CN4 794 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 HARBI1Q96MB7 349 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ZNF583Q96ND8 569 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 LRRC1Q9BTT6 524 aa4.83□□□□□ -1.64
DHFR-204ENST00000508282 ZNF334Q9HCZ1 680 aaPredicted RBP4.83□□□□□ -1.64
DHFR-204ENST00000508282 ERRFI1Q9UJM3 462 aaPredicted RBP4.83□□□□□ -1.64
DHFR-204ENST00000508282 CTAGE9A4FU28 777 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 M0QZ24 198 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 CTAGE8P0CG41 777 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 UBA1P22314 1058 aaKnown RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 TIMP3P35625 211 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 UBA7P41226 1012 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 GLIPR1P48060 266 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 CSTF3Q12996 717 aaKnown RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 G3BP1Q13283 466 aaKnown RBP eCLIP4.82□□□□□ -1.64
DHFR-204ENST00000508282 TSTQ16762 297 aaKnown RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 TTI2Q6NXR4 508 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 KCTD8Q6ZWB6 473 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 SLC26A9Q7LBE3 791 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 GPR180Q86V85 440 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 CTAGE4Q8IX94 777 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 DIS3L2Q8IYB7 885 aaKnown RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 METTL27Q8N6F8 245 aaPredicted RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 PCYOX1LQ8NBM8 494 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 NAXEQ8NCW5 288 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 THAP6Q8TBB0 222 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 ALG14Q96F25 216 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 POLR3CQ9BUI4 534 aaPredicted RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 POLR1BQ9H9Y6 1135 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 RANGRFQ9HD47 186 aaPredicted RBP4.82□□□□□ -1.64
DHFR-204ENST00000508282 FBXL2Q9UKC9 423 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 MAU2Q9Y6X3 613 aa4.82□□□□□ -1.64
DHFR-204ENST00000508282 CCDC189A1A4V9 331 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 FAM90A26D6RGX4 464 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ANKRD28O15084 1053 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ZNHIT1O43257 154 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 MLYCDO95822 493 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 SPARCP09486 303 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 BSGP35613 385 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
DHFR-204ENST00000508282 EEF1A1P68104 462 aaKnown RBP4.81□□□□□ -1.64
DHFR-204ENST00000508282 MAD2L1Q13257 205 aaPredicted RBP4.81□□□□□ -1.64
DHFR-204ENST00000508282 TBCEQ15813 527 aaPredicted RBP4.81□□□□□ -1.64
DHFR-204ENST00000508282 TMEM35AQ53FP2 167 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ALFQ53S48 1182 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 EEF1A1P5Q5VTE0 462 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 FAM171BQ6P995 826 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 CYP20A1Q6UW02 462 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ETNPPLQ8TBG4 499 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 SLC44A1Q8WWI5 657 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 ARHGEF26Q96DR7 871 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 PPM1MQ96MI6 270 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 WDFY2Q96P53 400 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 PDCL3Q9H2J4 239 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 FKRPQ9H9S5 495 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 OR14J1Q9UGF5 321 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 CLIC4Q9Y696 253 aa4.81□□□□□ -1.64
DHFR-204ENST00000508282 HS3ST1O14792 307 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 KCNN4O15554 427 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 JRKO75564 520 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 RTN3O95197 1032 aaPredicted RBP4.8□□□□□ -1.64
DHFR-204ENST00000508282 CLEC3BP05452 202 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 CFC1P0CG37 223 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 FAM106CPP0CH98 169 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 POLR2CP19387 275 aaPredicted RBP4.8□□□□□ -1.64
DHFR-204ENST00000508282 UGT1A1P22309 533 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 ELF1P32519 619 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
DHFR-204ENST00000508282 PMS2CLQ68D20 193 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms