RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PSTPIP1O43586 416 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 EML2O95834 649 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 PYGLP06737 847 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 PTPN3P26045 913 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 PHF19Q5T6S3 580 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 ALS2CLQ60I27 953 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 USP53Q70EK8 1073 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 GPR155Q7Z3F1 870 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 CCHCR1Q8TD31 782 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 HAUS1Q96CS2 278 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 NUDT22Q9BRQ3 303 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 SLC25A51Q9H1U9 297 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 GLOD4Q9HC38 313 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 UBP1Q9NZI7 540 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 PISDQ9UG56 409 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 ZNHIT2Q9UHR6 403 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 LOXL2Q9Y4K0 774 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 PCDHA13Q9Y5I0 950 aa14.17□□□□□ -0.14
RAB28-205ENST00000508274 BAHCC1Q9P281 2608 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 TRBV23OR9-2A0A075B6M9 112 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 A0A0A6YYK5 440 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 F5H423 210 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 PRB1P04280 392 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 SLC5A2P31639 672 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 CD68P34810 354 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 ETV5P41161 510 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 CDK18Q07002 472 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 CLN3Q13286 438 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 EIF3IQ13347 325 aaKnown RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 NR1D2Q14995 579 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 TEX44Q53QW1 395 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 ZNF648Q5T619 568 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 ARHGAP40Q5TG30 622 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 BROXQ5VW32 411 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 NKAIN2Q5VXU1 208 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 ZNF574Q6ZN55 896 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 CHST15Q7LFX5 561 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 ZNF761Q86XN6 746 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 JAMLQ86YT9 394 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 RAVER1Q8IY67 606 aaKnown RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 GPR26Q8NDV2 337 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 KRT35Q92764 455 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 UBL7Q96S82 380 aaPredicted RBP14.16□□□□□ -0.14
RAB28-205ENST00000508274 DPH1Q9BZG8 443 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 ZFYVE1Q9HBF4 777 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 VPS18Q9P253 973 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 KCNK6Q9Y257 313 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 ZNF711Q9Y462 761 aa14.16□□□□□ -0.14
RAB28-205ENST00000508274 hCG_1818297A0A087WSY0 165 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 RCCD1A6NED2 376 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 SOWAHDA6NJG2 315 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 TMX2-CTNND1H3BSU7 103 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 AURKAO14965 403 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 PMPCBO75439 489 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 CPNE6O95741 557 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 JMJD7P0C870 316 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 ACP5P13686 325 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 CD1CP29017 333 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 MLLT3P42568 568 aaPredicted RBP14.15□□□□□ -0.14
RAB28-205ENST00000508274 TMPRSS3P57727 454 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 WASHC5Q12768 1159 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 BIRC2Q13490 618 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 TFDP2Q14188 446 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 C16orf72Q14CZ0 275 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 NOMO1Q15155 1222 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 TFDP3Q5H9I0 405 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 ZC3H18Q86VM9 953 aaKnown RBP14.15□□□□□ -0.14
RAB28-205ENST00000508274 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 SLC37A2Q8TED4 501 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 TFB1MQ8WVM0 346 aaKnown RBP14.15□□□□□ -0.14
RAB28-205ENST00000508274 TEKT5Q96M29 485 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 SPATA16Q9BXB7 569 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 RBSNQ9H1K0 784 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 SPO11Q9Y5K1 396 aa14.15□□□□□ -0.14
RAB28-205ENST00000508274 NFKB1P19838 968 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 CSF2RBP32927 897 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 NR2C2P49116 596 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 CFHR1Q03591 330 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 PCSK4Q6UW60 755 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 PIM3Q86V86 326 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 CCDC50Q8IVM0 306 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 KATNAL2Q8IYT4 538 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 P3H4Q92791 437 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 MAGEE1Q9HCI5 957 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 WDR70Q9NW82 654 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 ATXN10Q9UBB4 475 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 TBC1D29Q9UFV1 150 aa14.14□□□□□ -0.15
RAB28-205ENST00000508274 IGHV1OR21-1A0A087WYE8 117 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 TEX51A0A1B0GUA7 166 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 RGSL1A5PLK6 1076 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 PRAMEF10O60809 474 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ZRANB2O95218 330 aaKnown RBP eCLIP14.13□□□□□ -0.15
RAB28-205ENST00000508274 NDST3O95803 873 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ZNF8P17098 575 aaPredicted RBP14.13□□□□□ -0.15
RAB28-205ENST00000508274 CHRNA4P43681 627 aa14.13□□□□□ -0.15
RAB28-205ENST00000508274 ZNF75DP51815 510 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms