RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 PSMA2P25787 234 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 GABRB3P28472 473 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TKTP29401 623 aaKnown RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 SDC4P31431 198 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TUFMP49411 452 aaKnown RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 GLUD2P49448 558 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 ARFIP2P53365 341 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 HDAC4P56524 1084 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 DR1Q01658 176 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 ACY1Q03154 408 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 SLC13A2Q13183 592 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 PLD1Q13393 1074 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TDGQ13569 410 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 KBTBD12Q3ZCT8 623 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 BOLA3Q53S33 107 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 SH2D4BQ5SQS7 431 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 ANKRD34AQ69YU3 496 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TIGD7Q6NT04 549 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 CCDC91Q7Z6B0 441 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TMEM130Q8N3G9 435 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 MAFAQ8NHW3 353 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 EZH1Q92800 747 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 UBE2FQ969M7 185 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 MAP6Q96JE9 813 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TTC25Q96NG3 672 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 MCEEQ96PE7 176 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 CDK5RAP1Q96SZ6 601 aaKnown RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 SMOQ99835 787 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 TRIM54Q9BYV2 358 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 RAB17Q9H0T7 212 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 SLAMF7Q9NQ25 335 aa7.16□□□□□ -1.26
CLCN3-206ENST00000507875 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 CWC15Q9P013 229 aaKnown RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 PRG3Q9Y2Y8 225 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-206ENST00000507875 GRXCR1A8MXD5 290 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 PAPSS1O43252 624 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-206ENST00000507875 MPIG6BO95866 241 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 KRT14P02533 472 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 ITGB1P05556 798 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 FPR1P21462 350 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 ACAT1P24752 427 aaKnown RBP7.15□□□□□ -1.26
CLCN3-206ENST00000507875 HNF4AP41235 474 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 MATKP42679 507 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 KIR3DL1P43629 444 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 PPP3CCP48454 512 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 MARCKSL1P49006 195 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 GSK3AP49840 483 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 SOX8P57073 446 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 DAOAP59103 153 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 CTBP1Q13363 440 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 DHX34Q14147 1143 aaKnown RBP7.15□□□□□ -1.26
CLCN3-206ENST00000507875 PDK2Q15119 407 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 TANGO2Q6ICL3 276 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 AADACL2Q6P093 401 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 LEKR1Q6ZMV7 388 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 BBOF1Q8ND07 529 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 OR10T2Q8NGX3 314 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 OR56A3Q8NH54 315 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 IFI44Q8TCB0 444 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 MYLIPQ8WY64 445 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 NT5C3BQ969T7 300 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 LRRC45Q96CN5 670 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-206ENST00000507875 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 YME1L1Q96TA2 773 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 SOX7Q9BT81 388 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 C11orf84Q9BUA3 381 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-206ENST00000507875 WNT5BQ9H1J7 359 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 NEUROG2Q9H2A3 272 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 POPDC2Q9HBU9 364 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 FAM114A2Q9NRY5 505 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 MTUS1Q9ULD2 1270 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 HS3ST4Q9Y661 456 aa7.15□□□□□ -1.26
CLCN3-206ENST00000507875 DENND4CQ5VZ89 1909 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 FAM92AA1XBS5 289 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 MDM4O15151 490 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 ATP2C2O75185 946 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 NPPAP01160 153 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 PDHA1P08559 390 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 THEGLP0DJG4 465 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 HAPLN1P10915 354 aaPredicted RBP7.15□□□□□ -1.27
CLCN3-206ENST00000507875 PDGFRAP16234 1089 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 ABCD3P28288 659 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 CHRNA3P32297 505 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 HTR7P34969 479 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 RFC1P35251 1148 aaPredicted RBP7.15□□□□□ -1.27
CLCN3-206ENST00000507875 GATMP50440 423 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 TKTL1P51854 596 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 YWHAZP63104 245 aaKnown RBP7.15□□□□□ -1.27
CLCN3-206ENST00000507875 DEFB103AP81534 67 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 MGAT5Q09328 741 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 PSMD5Q16401 504 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 GAB4Q2WGN9 574 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 TTMPQ5BVD1 217 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 SPOUT1Q5T280 376 aaKnown RBP7.15□□□□□ -1.27
CLCN3-206ENST00000507875 CYP4A22Q5TCH4 519 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 RAP1GAP2Q684P5 730 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 BNIPLQ7Z465 357 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 MAP7D3Q8IWC1 876 aa7.15□□□□□ -1.27
CLCN3-206ENST00000507875 PDZD8Q8NEN9 1154 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms