RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CARNS1A5YM72 827 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 TSPAN12O95859 305 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 UGT2B4P06133 528 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 RBP1P09455 135 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PBX2P40425 430 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 LAMB3Q13751 1172 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZNF77Q15935 545 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 GEN1Q17RS7 908 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 NXNQ6DKJ4 435 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 TMC5Q6UXY8 1006 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 CYHR1Q6ZMK1 362 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 CUZD1Q86UP6 607 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 CPNE9Q8IYJ1 553 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 IRF7Q92985 503 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZFYVE19Q96K21 471 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZFYVE1Q9HBF4 777 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 IL26Q9NPH9 171 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 INTS10Q9NVR2 710 aaKnown RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 GEMIN8Q9NWZ8 242 aaKnown RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZNF510Q9Y2H8 683 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 H0Y3Z8 333 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 H2AFYO75367 372 aaKnown RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 PRAMEF1O95521 474 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PENKP01210 267 aaPredicted RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 CYBBP04839 570 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 BPIP17213 487 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 AOC1P19801 751 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 LHCGRP22888 699 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 VIPR2P41587 438 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 RASSF2P50749 326 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 CCNHP51946 323 aaPredicted RBP12.13□□□□□ -0.47
LIN54-206ENST00000506560 FOXA1P55317 472 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 DNAJB13P59910 316 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 FRMD7Q6ZUT3 714 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ADIPOR2Q86V24 386 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ADGRG2Q8IZP9 1017 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 CD200R1Q8TD46 325 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 EEF1AKMT1Q8WVE0 214 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 MAGEE1Q9HCI5 957 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PACSIN3Q9UKS6 424 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PLA2G4CQ9UP65 541 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
LIN54-206ENST00000506560 PABPC1P11940 636 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 PKMP14618 531 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 CPOXP36551 454 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 AGTR2P50052 363 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 PIWIL4Q7Z3Z4 852 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 RAB3IPQ96QF0 476 aaPredicted RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 KCNA7Q96RP8 456 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 CCDC68Q9H2F9 335 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 SPHK2Q9NRA0 654 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 UTP6Q9NYH9 597 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 TAS2R13Q9NYV9 303 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 GIMAP2Q9UG22 337 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 MBD1Q9UIS9 605 aaPredicted RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 ATG2AQ2TAZ0 1938 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 ATP6AP2A0A1C7CYW4 349 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 SPECC1L-ADORA2AF8WAN1 911 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 SDHDO14521 159 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 NPHS1O60500 1241 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 PEX11AO75192 247 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 ATP6AP2O75787 350 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 IGSF6O95976 241 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 CHRM3P20309 590 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 KPNA2P52292 529 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 BTKQ06187 659 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 KLF10Q13118 480 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 KPNB1Q14974 876 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 C18orf21Q32NC0 220 aaPredicted RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 CRTC1Q6UUV9 634 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 SERPINA9Q86WD7 417 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 SFTPA1Q8IWL2 248 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 GPR26Q8NDV2 337 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.12□□□□□ -0.47
LIN54-206ENST00000506560 STK39Q9UEW8 545 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
LIN54-206ENST00000506560 OAS3Q9Y6K5 1087 aaKnown RBP12.12□□□□□ -0.47
LIN54-206ENST00000506560 H7C0S8 307 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 ECI2O75521 394 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 HK3P52790 923 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 SH3BP2P78314 561 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 MXRA7P84157 204 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 RIPK1Q13546 671 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 CHRNA6Q15825 494 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 MYLK3Q32MK0 819 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 PREPLQ4J6C6 727 aaPredicted RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 KHDC1Q4VXA5 237 aaKnown RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 NAIF1Q69YI7 327 aaPredicted RBP12.11□□□□□ -0.47
LIN54-206ENST00000506560 DCBLD1Q8N8Z6 715 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 MCUR1Q96AQ8 359 aa12.11□□□□□ -0.47
LIN54-206ENST00000506560 THTPAQ9BU02 230 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms