RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DNASE1L3Q13609 305 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 NFYCQ13952 458 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 RPS6KA2Q15349 733 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 RFX4Q33E94 735 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 VPS26BQ4G0F5 336 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 FAM98BQ52LJ0 330 aaKnown RBP15.83■□□□□ 0.12
SCLT1-208ENST00000506368 KIAA0930Q6ICG6 404 aaPredicted RBP15.83■□□□□ 0.12
SCLT1-208ENST00000506368 ZBTB46Q86UZ6 589 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 FAM131BQ86XD5 332 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 ZDHHC13Q8IUH4 622 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 RASSF5Q8WWW0 418 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 SEPT1Q8WYJ6 367 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 NT5C3BQ969T7 300 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 DACH2Q96NX9 599 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 ASPSCR1Q9BZE9 553 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 DPP3Q9NY33 737 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 VPS51Q9UID3 782 aa15.83■□□□□ 0.12
SCLT1-208ENST00000506368 RBMX2Q9Y388 322 aaKnown RBP15.83■□□□□ 0.12
SCLT1-208ENST00000506368 OAS3Q9Y6K5 1087 aaKnown RBP15.83■□□□□ 0.12
SCLT1-208ENST00000506368 CENPFP49454 3210 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PEX10O60683 326 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 GABBR2O75899 941 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ENO2P09104 434 aaPredicted RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 RYKP34925 604 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 KCNK10P57789 538 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ADAM17P78536 824 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 IFITM2Q01629 132 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 MBTD1Q05BQ5 628 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 UGT3A2Q3SY77 523 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 BTBD8Q5XKL5 378 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 CYHR1Q6ZMK1 362 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PIGZQ86VD9 579 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ARL10Q8N8L6 244 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 DYNC2LI1Q8TCX1 351 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 RORBQ92753 470 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 VPS33AQ96AX1 596 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 BIRC7Q96CA5 298 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ATG4CQ96DT6 458 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 FAM118AQ9NWS6 357 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 LEF1Q9UJU2 399 aaPredicted RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ADAMTS5Q9UNA0 930 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PCDHB3Q9Y5E6 796 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 B4GAT1O43505 415 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 SOAT2O75908 522 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 S100BP04271 92 aaPredicted RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 NFKB1P19838 968 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 TUBA1BP68363 451 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 SCAPQ12770 1279 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 OLIG2Q13516 323 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 RCAN2Q14206 197 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 CSHL1Q14406 222 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PAGE2BQ5JRK9 111 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ZNF678Q5SXM1 525 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 TUBA1AQ71U36 451 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 BEND5Q7L4P6 421 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 EFL1Q7Z2Z2 1120 aaKnown RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PIWIL3Q7Z3Z3 882 aaKnown RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ACOT1Q86TX2 421 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 ATL1Q8WXF7 558 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 TSGA13Q96PP4 275 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 RBM4BQ9BQ04 359 aaKnown RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 RBM4Q9BWF3 364 aaKnown RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 MAGEB5Q9BZ81 275 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 IL1RL2Q9HB29 575 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 NTN4Q9HB63 628 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 SLC52A3Q9NQ40 469 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 GMPR2Q9P2T1 348 aaKnown RBP15.82■□□□□ 0.12
SCLT1-208ENST00000506368 C3orf18Q9UK00 162 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 CARD8Q9Y2G2 431 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 PCDHGA8Q9Y5G5 932 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 TRIP11Q15643 1979 aa15.82■□□□□ 0.12
SCLT1-208ENST00000506368 EVPLLA8MZ36 301 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 C19orf81C9J6K1 198 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 NDUFB5O43674 189 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 SEC24AO95486 1093 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 HTR1AP08908 422 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 TGFB3P10600 412 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 ACVR2AP27037 513 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 GRIK1P39086 918 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 EIF2DP41214 584 aaKnown RBP15.81■□□□□ 0.12
SCLT1-208ENST00000506368 ALDH7A1P49419 539 aaKnown RBP15.81■□□□□ 0.12
SCLT1-208ENST00000506368 GP2P55259 537 aaKnown RBP15.81■□□□□ 0.12
SCLT1-208ENST00000506368 HERVK_113P63132 956 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 LRIT3Q3SXY7 679 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 ZC3H12BQ5HYM0 836 aaKnown RBP15.81■□□□□ 0.12
SCLT1-208ENST00000506368 P2RY8Q86VZ1 359 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 PHYKPLQ8IUZ5 450 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 TMBIM1Q969X1 311 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 RNF145Q96MT1 663 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 SNX18Q96RF0 628 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 ERVK-6Q9BXR3 956 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 DGCR6LQ9BY27 220 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 UGT2B28Q9BY64 529 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 LRRC3Q9BY71 257 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 SOX17Q9H6I2 414 aaPredicted RBP15.81■□□□□ 0.12
SCLT1-208ENST00000506368 DERAQ9Y315 318 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 HSPE1-MOB4S4R3N1 261 aa15.81■□□□□ 0.12
SCLT1-208ENST00000506368 UPK1AO00322 258 aa15.8■□□□□ 0.12
SCLT1-208ENST00000506368 AURKAO14965 403 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms