RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MAGEC3Q8TD91 643 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 GAD1Q99259 594 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 C6orf106Q9H6K1 298 aaPredicted RBP4□□□□□ -1.77
TOPBP1-204ENST00000505804 MCM9Q9NXL9 1143 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF224Q9NZL3 707 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 SELENONQ9NZV5 590 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 TBC1D29Q9UFV1 150 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 SIX4Q9UIU6 781 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 VPS28Q9UK41 221 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 GPR34Q9UPC5 381 aa4□□□□□ -1.77
TOPBP1-204ENST00000505804 A0A0G2JPF8 293 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 MAGEA13PA6NCF6 341 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 GOLGA6L9A6NEM1 432 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 AGAP14A8MT82 685 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 HNRNPCL3B7ZW38 293 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF587BE7ETH6 402 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 PROB1E7EW31 1015 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 GPC4O75487 556 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 HIST1H2ABP04908 130 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 RB1P06400 928 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 HNRNPCL4P0DMR1 293 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 HIST1H2ADP20671 130 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 S1PR1P21453 382 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ACADLP28330 430 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 CORO1AP31146 461 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 APOBEC1P41238 236 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 TMPOP42166 694 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 CAMPP49913 170 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 MRPS34P82930 218 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ACSM2AQ08AH3 577 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 MAD2L1Q13257 205 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 SNTA1Q13424 505 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 TNFAIP1Q13829 316 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ASIC2Q16515 512 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 DECR1Q16698 335 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 IZUMO4Q1ZYL8 232 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 DUSP28Q4G0W2 176 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 LCE1AQ5T7P2 110 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 C9orf57Q5W0N0 161 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 NSUN5P2Q63ZY6 315 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ACSM2BQ68CK6 577 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 CFAP161Q6P656 301 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 BRAT1Q6PJG6 821 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 CFAP77Q6ZQR2 320 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 HIST3H2AQ7L7L0 130 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 TSPAN33Q86UF1 283 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 NRROSQ86YC3 692 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ODF3L1Q8IXM7 274 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ACVR1CQ8NER5 493 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 OR1J2Q8NGS2 313 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 OR5R1Q8NH85 324 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 SLC20A1Q8WUM9 679 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ABTB1Q969K4 478 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 FAM120BQ96EK7 910 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 BICD1Q96G01 975 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 TMEM19Q96HH6 336 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 PGAM5Q96HS1 289 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF385AQ96PM9 386 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 C1QTNF4Q9BXJ3 329 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 OGFRQ9NZT2 677 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 ADD3Q9UEY8 706 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 FBXW11Q9UKB1 542 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 PADI1Q9ULC6 663 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 PADI3Q9ULW8 664 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 KLHL20Q9Y2M5 609 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 PCDHGB1Q9Y5G3 927 aa3.99□□□□□ -1.77
TOPBP1-204ENST00000505804 SAA2-SAA4A0A096LPE2 208 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 HNRNPCL2B2RXH8 293 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 DAB1O75553 588 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 GJB3O75712 270 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 TPPPO94811 219 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 SRPRAP08240 638 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 FGF3P11487 239 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 ALOX12P18054 663 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 PSMB10P40306 273 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 NLRP5P59047 1200 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 TAS2R38P59533 333 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 EEF1A2Q05639 463 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 PCGF3Q3KNV8 242 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 RILPL1Q5EBL4 403 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 SPATA1Q5VX52 437 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 C18orf63Q68DL7 685 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 KIAA1161Q6NSJ0 714 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 FAM122CQ6P4D5 195 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 TMED8Q6PL24 325 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 SZRD1Q7Z422 152 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 C17orf53Q8N3J3 647 aaPredicted RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 ZNF441Q8N8Z8 693 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 C1orf131Q8NDD1 294 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 FIG4Q92562 907 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 TAAR8Q969N4 342 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 SMC6Q96SB8 1091 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 SLCO5A1Q9H2Y9 848 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 MAGIXQ9H6Y5 334 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 DDX31Q9H8H2 851 aaKnown RBP3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 LRRC4Q9HBW1 653 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 EPB41L5Q9HCM4 733 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 TMEM30AQ9NV96 361 aa3.98□□□□□ -1.77
TOPBP1-204ENST00000505804 UBA2Q9UBT2 640 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms