RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 LIG3P49916 1009 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ADARP55265 1226 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 CBX1P83916 185 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 GUCY1A3Q02108 690 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 GRSF1Q12849 480 aaKnown RBP eCLIP10.33□□□□□ -0.76
TPM3-217ENST00000504663 ATP13A5Q4VNC0 1218 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 KHDC1Q4VXA5 237 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 FASTKD1Q53R41 847 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 HECTD2Q5U5R9 776 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 MRNIPQ6NTE8 343 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 Q6ZVL8 140 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 TAOK1Q7L7X3 1001 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SNX20Q7Z614 316 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 PIM3Q86V86 326 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SERPINA9Q86WD7 417 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 CACUL1Q86Y37 369 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 RAVER1Q8IY67 606 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 TMEM151AQ8N4L1 468 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 GIMAP7Q8NHV1 300 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 RPLP0P6Q8NHW5 317 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 TCP10LQ8TDR4 215 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SCAMP4Q969E2 229 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ALKBH8Q96BT7 664 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 DTD2Q96FN9 168 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 TCF12Q99081 682 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SLC30A3Q99726 388 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SELENOSQ9BQE4 189 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 BOCQ9BWV1 1114 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ABCG8Q9H221 673 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ARHGEF3Q9NR81 526 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ZNF358Q9NW07 568 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 GALPQ9UBC7 116 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 CD84Q9UIB8 345 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 ADAM21Q9UKJ8 722 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 MMP17Q9ULZ9 603 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 SMG5Q9UPR3 1016 aaKnown RBP10.33□□□□□ -0.76
TPM3-217ENST00000504663 PKP3Q9Y446 797 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 IKBKGQ9Y6K9 419 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 PRSS21Q9Y6M0 314 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 PIKFYVEQ9Y2I7 2098 aa10.33□□□□□ -0.76
TPM3-217ENST00000504663 CHURC1-FNTBB4DL54 471 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ADH1BP00325 375 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 C6P13671 934 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 C5AR1P21730 350 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CD9P21926 228 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 RPS3P23396 243 aaKnown RBP eCLIP10.32□□□□□ -0.76
TPM3-217ENST00000504663 CRHR1P34998 444 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 POLD2P49005 469 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 STARD6P59095 220 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 PRKCQQ04759 706 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 FGL2Q14314 439 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 FBXO43Q4G163 708 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ZRANB3Q5FWF4 1079 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CES4AQ5XG92 561 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 TTC19Q6DKK2 380 aaPredicted RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ZNF765Q7L2R6 523 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CYP2U1Q7Z449 544 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 DSG4Q86SJ6 1040 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 TTC7BQ86TV6 843 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 NDUFAF2Q8N183 169 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 NXPE1Q8N323 547 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 NAT14Q8WUY8 206 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ANKRD49Q8WVL7 239 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 RAB7BQ96AH8 199 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CENPTQ96BT3 561 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 PPP1R16AQ96I34 528 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 SMC6Q96SB8 1091 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CCDC134Q9H6E4 229 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ASB8Q9H765 288 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CNOT10Q9H9A5 744 aaKnown RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 FBRSQ9HAH7 460 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 MLXIPLQ9NP71 852 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CD320Q9NPF0 282 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 IGSF5Q9NSI5 407 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 PKD2L2Q9NZM6 624 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 APPL1Q9UKG1 709 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 IKZF3Q9UKT9 509 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 SLC39A10Q9ULF5 831 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 CNOT6Q9ULM6 557 aaKnown RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 CORO1CQ9ULV4 474 aaPredicted RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 CA14Q9ULX7 337 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 ZFR2Q9UPR6 939 aaKnown RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 SORCS3Q9UPU3 1222 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 FAM50BQ9Y247 325 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 FNDC3AQ9Y2H6 1198 aaKnown RBP10.32□□□□□ -0.76
TPM3-217ENST00000504663 CRYL1Q9Y2S2 319 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 COQ6Q9Y2Z9 468 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 PLLPQ9Y342 182 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 PLXND1Q9Y4D7 1925 aa10.32□□□□□ -0.76
TPM3-217ENST00000504663 A0A096LPK6 155 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 A0A1W2PP55 124 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 RGSL1A5PLK6 1076 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 TARM1B6A8C7 271 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 K7ESM1 405 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 PLRG1O43660 514 aaKnown RBP10.31□□□□□ -0.76
TPM3-217ENST00000504663 TSPAN12O95859 305 aa10.31□□□□□ -0.76
TPM3-217ENST00000504663 PROCP04070 461 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms