RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 USP45Q70EL2 814 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 ZNF534Q76KX8 674 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 ZNF572Q7Z3I7 529 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 CACTIN-AS1Q8N1I8 211 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 MPP5Q8N3R9 675 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 PLA2G15Q8NCC3 412 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 OR13C4Q8NGS5 318 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 NAT14Q8WUY8 206 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 SCAMP4Q969E2 229 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 FUBP1Q96AE4 644 aaKnown RBP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 FAM131CQ96AQ9 280 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 SCRN2Q96FV2 425 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 AGAP2Q99490 1192 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 RHOXF2Q9BQY4 288 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 ADGRE3Q9BY15 652 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 GPR63Q9BZJ6 419 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 LRRC40Q9H9A6 602 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 FTSJ1Q9UET6 329 aa9.03□□□□□ -0.96
NR1I3-219ENST00000504010 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 V9GYY5 206 aaPredicted RBP9.03□□□□□ -0.96
NR1I3-219ENST00000504010 PLXNA2O75051 1894 aa9.02□□□□□ -0.96
NR1I3-219ENST00000504010 LRRK1Q38SD2 2015 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 K7ESM1 405 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 PSMD3O43242 534 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SLC7A4O43246 635 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SLC28A2O43868 658 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 TM7SF2O76062 418 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 RECQL5O94762 991 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 F7P08709 466 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 PRSS56P0CW18 603 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 CYP2A6P11509 494 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 CA5AP35218 305 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 GRIA4P48058 902 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 POLR2LP62875 67 aaKnown RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 BNC1Q01954 994 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ELP6Q0PNE2 266 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SGCGQ13326 291 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 TEX35Q5T0J7 233 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 FNBP1LQ5T0N5 605 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ZNF648Q5T619 568 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 RNASEH2BQ5TBB1 312 aaKnown RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 GLT6D1Q7Z4J2 308 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SPACA3Q8IXA5 215 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 KLHDC8BQ8IXV7 354 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 TTC30BQ8N4P2 665 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 MMGT1Q8N4V1 131 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ZNF248Q8NDW4 579 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 MNS1Q8NEH6 495 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 C1orf216Q8TAB5 229 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 HCAR2Q8TDS4 363 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 RAB7BQ96AH8 199 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 LRRC45Q96CN5 670 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 MED8Q96G25 268 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SERAC1Q96JX3 654 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ZNF778Q96MU6 729 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 MCCC1Q96RQ3 725 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ORAI3Q9BRQ5 295 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SLC17A9Q9BYT1 436 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 FAM96AQ9H5X1 160 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 PREBQ9HCU5 417 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 CASS4Q9NQ75 786 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 AASDHPPTQ9NRN7 309 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SYBUQ9NX95 663 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 SLC2A6Q9UGQ3 507 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 DMGDHQ9UI17 866 aaKnown RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 TPX2Q9ULW0 747 aaKnown RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
NR1I3-219ENST00000504010 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-219ENST00000504010 CREBBPQ92793 2442 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 A0A1B0GVT2 93 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 POM121BA6NF01 834 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 OR51F1A6NGY5 319 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 INPP4BO15327 924 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 TSPAN6O43657 245 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 AP1G1O43747 822 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 RFPL3O75679 317 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 WNT1P04628 370 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 FGF1P05230 155 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 HLA-DPA1P20036 260 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 IGFALSP35858 605 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 CSNK1EP49674 416 aaKnown RBP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 STC1P52823 247 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 RPS21P63220 83 aaKnown RBP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 GUCY2DQ02846 1103 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 TARDBPQ13148 414 aaKnown RBP eCLIP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 ILKQ13418 452 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 MSLNQ13421 630 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 DHX34Q14147 1143 aaKnown RBP9.01□□□□□ -0.97
NR1I3-219ENST00000504010 IRF4Q15306 451 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 WSCD2Q2TBF2 565 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 TBC1D25Q3MII6 688 aa9.01□□□□□ -0.97
NR1I3-219ENST00000504010 MSS51Q4VC12 460 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms