RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 NCKIPSDQ9NZQ3 722 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 MOSPD1Q9UJG1 213 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 TMEM98Q9Y2Y6 226 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 ARL5AQ9Y689 179 aa18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 OAS3Q9Y6K5 1087 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-209ENST00000503346 LY6G6EA0A0G2JKS1 128 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 ZNF185O15231 689 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 BUD23O43709 281 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 CRTAMO95727 393 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 GNPDA1P46926 289 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 PDE1BQ01064 536 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 DNAJC3Q13217 504 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 ILKQ13418 452 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 PAPD7Q5XG87 772 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 GPBAR1Q8TDU6 330 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 SCG3Q8WXD2 468 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 GLYATL1Q969I3 302 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 MAGOHBQ96A72 148 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 VPS35Q96QK1 796 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 SMARCAL1Q9NZC9 954 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 DOLKQ9UPQ8 538 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 WASF3Q9UPY6 502 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 U3KQA8 63 aa18.08■□□□□ 0.48
PDLIM7-209ENST00000503346 GLYATL1P3A0A0U1RQE8 302 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 E7EVH7 732 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 ASMTLO95671 621 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 CDK4P11802 303 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 DAB2P98082 770 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 ATP13A5Q4VNC0 1218 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 PYCR3Q53H96 274 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 TTC27Q6P3X3 843 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 RAB44Q7Z6P3 723 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 PHYKPLQ8IUZ5 450 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 PNPLA1Q8N8W4 532 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 OR4K2Q8NGD2 314 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 OR2M4Q96R27 311 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 NAPGQ99747 312 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 RMI1Q9H9A7 625 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 TRIM39Q9HCM9 518 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 EIF2B3Q9NR50 452 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 EVA1BQ9NVM1 165 aa18.07■□□□□ 0.48
PDLIM7-209ENST00000503346 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GPR89AB7ZAQ6 455 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GAPDHSO14556 408 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 LDB2O43679 373 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 DNAJC6O75061 913 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 RFPL3O75679 317 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 SLC25A14O95258 325 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GPR89BP0CG08 455 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 COILP38432 576 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 ADCY8P40145 1251 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 LMAN1P49257 510 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 DUSP3P51452 185 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 ZNF140P52738 457 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 CDH17Q12864 832 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 ILF3Q12906 894 aaKnown RBP eCLIP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 FOXC1Q12948 553 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 PTPRCAPQ14761 206 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 TCEA2Q15560 299 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 CHRNA6Q15825 494 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 FAM151BQ6UXP7 276 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 MARK2Q7KZI7 788 aaKnown RBP18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 TAF8Q7Z7C8 310 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 NRROSQ86YC3 692 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GALNT13Q8IUC8 556 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 SLC35F3Q8IY50 421 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 OR52K1Q8NGK4 314 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 CCL4L1Q8NHW4 92 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GLMNQ92990 594 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 GSDMCQ9BYG8 508 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 TMPRSS11EQ9UL52 423 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 KCTD3Q9Y597 815 aa18.06■□□□□ 0.48
PDLIM7-209ENST00000503346 SPTBN2O15020 2390 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 ARID1BQ8NFD5 2236 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 CTAGE9A4FU28 777 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 NUAK1O60285 661 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 PHF2O75151 1096 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 APRTP07741 180 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 TPH1P17752 444 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 RPIAP49247 311 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 FNTAP49354 379 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 SHC2P98077 582 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 ITGA9Q13797 1035 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 LRP8Q14114 963 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 NR0B2Q15466 257 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 OGFOD3Q6PK18 319 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 ADGRG6Q86SQ4 1221 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 ARL10Q8N8L6 244 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 OR13C4Q8NGS5 318 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 SUDS3Q9H7L9 328 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 CASS4Q9NQ75 786 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 SMOXQ9NWM0 555 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 ATXN10Q9UBB4 475 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 APPL1Q9UKG1 709 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 GPR34Q9UPC5 381 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 GPSM3Q9Y4H4 160 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 PCYT1BQ9Y5K3 369 aaPredicted RBP18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 SAR1BQ9Y6B6 198 aa18.05■□□□□ 0.48
PDLIM7-209ENST00000503346 LRP4O75096 1905 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms