RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 PIANPQ8IYJ0 282 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 CHPFQ8IZ52 775 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 KIRREL3Q8IZU9 778 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 NXPE1Q8N323 547 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 NKAPQ8N5F7 415 aaKnown RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 GPATCH11Q8N954 259 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 OR2T3Q8NH03 318 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 RHEBL1Q8TAI7 183 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 MDM1Q8TC05 714 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 PDLIM5Q96HC4 596 aaKnown RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 LRCH3Q96II8 777 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 COQ10AQ96MF6 247 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 BIRC8Q96P09 236 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 FAM111AQ96PZ2 611 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 MRPL57Q9BQC6 102 aaKnown RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 TSSK1BQ9BXA7 367 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 C1QTNF1Q9BXJ1 281 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 FAM126AQ9BYI3 521 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 CLPBQ9H078 707 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 KDM4CQ9H3R0 1056 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 FAM83DQ9H4H8 585 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 SUDS3Q9H7L9 328 aaPredicted RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 ZDHHC3Q9NYG2 299 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 GNPTGQ9UJJ9 305 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 TMCO1Q9UM00 188 aa9.02□□□□□ -0.97
NR1I3-216ENST00000502848 OAS3Q9Y6K5 1087 aaKnown RBP9.02□□□□□ -0.97
NR1I3-216ENST00000502848 SCN8AQ9UQD0 1980 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 OR51F1A6NGY5 319 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 GOLGA8RI6L899 631 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 WNT9AO14904 365 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 KPNA5O15131 536 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 BUD23O43709 281 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 BPGMP07738 259 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 LTA4HP09960 611 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CBSLP0DN79 551 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ZNF37AP17032 561 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CBSP35520 551 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 P2RY2P41231 377 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ATP6V0D1P61421 351 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 TMPRSS15P98073 1019 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SATB1Q01826 763 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 PRKCQQ04759 706 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SEMA3AQ14563 771 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ZNF284Q2VY69 593 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 HABP4Q5JVS0 413 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 EOGTQ5NDL2 527 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 PSAPL1Q6NUJ1 521 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 NEK5Q6P3R8 708 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 LIPIQ6XZB0 460 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 USP30Q70CQ3 517 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CMC1Q7Z7K0 106 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 TSPAN33Q86UF1 283 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 KBTBD6Q86V97 674 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SERPINA9Q86WD7 417 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SPATS2Q86XZ4 545 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CENPLQ8N0S6 344 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 GPR26Q8NDV2 337 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 DDHD1Q8NEL9 900 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 LRRC8CQ8TDW0 803 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ASB12Q8WXK4 309 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 MYLIPQ8WY64 445 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 DTD2Q96FN9 168 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 PANX3Q96QZ0 392 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 KLF6Q99612 283 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 COPS8Q99627 209 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SLC13A1Q9BZW2 595 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 DERL2Q9GZP9 239 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 MRPL46Q9H2W6 279 aaKnown RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ASB8Q9H765 288 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 NMRAL1Q9HBL8 299 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 GPAMQ9HCL2 828 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CACNA2D2Q9NY47 1150 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.01□□□□□ -0.97
NR1I3-216ENST00000502848 SLC17A7Q9P2U7 560 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 CRLS1Q9UJA2 301 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 FZD4Q9ULV1 537 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 DUSP12Q9UNI6 340 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 ANKRD36A6QL64 1941 aa9.01□□□□□ -0.97
NR1I3-216ENST00000502848 UBA6A0AVT1 1052 aaPredicted RBP9□□□□□ -0.97
NR1I3-216ENST00000502848 KLHL33A6NCF5 533 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 FOXO6A8MYZ6 492 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 CCL22O00626 93 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 SPINT1O43278 529 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 MAGEC1O60732 1142 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 TGDSO95455 350 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 SLC4A1P02730 911 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 RALBP11234 206 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 HLA-EP13747 358 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 TAC1P20366 129 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 MAPK9P45984 424 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 SOX9P48436 509 aa9□□□□□ -0.97
NR1I3-216ENST00000502848 CCR3P51677 355 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms