RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 C20orf141Q9NUB4 165 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 C2orf42Q9NWW7 574 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 MAP3K20Q9NYL2 800 aaKnown RBP3.56□□□□□ -1.84
SMC4-227ENST00000497984 POLG2Q9UHN1 485 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 CNOT7Q9UIV1 285 aaKnown RBP3.56□□□□□ -1.84
SMC4-227ENST00000497984 ACSL5Q9ULC5 683 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 C2CD2Q9Y426 696 aa3.56□□□□□ -1.84
SMC4-227ENST00000497984 CCDC196A0A1B0GTZ2 297 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 CIDEAO60543 219 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 TACC1O75410 805 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 EIF3JO75822 258 aaKnown RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 POLR2CP19387 275 aaPredicted RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 SP100P23497 879 aaPredicted RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 PGM1P36871 562 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 GRIK2Q13002 908 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 RNPS1Q15287 305 aaKnown RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 ZC2HC1CQ53FD0 456 aaPredicted RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 TMEM35AQ53FP2 167 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 FRG2Q64ET8 278 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 TTI2Q6NXR4 508 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 TMEM81Q6P7N7 255 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 QSOX2Q6ZRP7 698 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 SLC46A3Q7Z3Q1 461 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 BEST3Q8N1M1 668 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 HMGCLL1Q8TB92 370 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 ZCCHC10Q8TBK6 192 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 ZNF473Q8WTR7 871 aaKnown RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 OPRPNQ99935 248 aaPredicted RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 INTS2Q9H0H0 1204 aaKnown RBP3.55□□□□□ -1.84
SMC4-227ENST00000497984 PPP1R14DQ9NXH3 145 aa3.55□□□□□ -1.84
SMC4-227ENST00000497984 PSMD14O00487 310 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 IFIT1P09914 478 aaKnown RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 ARL1P40616 181 aaPredicted RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 FASLGP48023 281 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 IRX6P78412 446 aaPredicted RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 NAE1Q13564 534 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 DHX8Q14562 1220 aaKnown RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 ZRSR2Q15696 482 aaKnown RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 ZFP69Q49AA0 526 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 RBMS3Q6XE24 437 aaKnown RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 NRROSQ86YC3 692 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 ACVR1CQ8NER5 493 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 SLC38A5Q8WUX1 472 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 ORAI1Q96D31 301 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 ARHGEF26Q96DR7 871 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 GRAMD2BQ96HH9 432 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 UBXN10Q96LJ8 280 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 LINC00479Q96M42 142 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 MPHOSPH8Q99549 860 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 GLIS2Q9BZE0 524 aaPredicted RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 GPR63Q9BZJ6 419 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 UBXN6Q9BZV1 441 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 WDR13Q9H1Z4 485 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 TTYH1Q9H313 450 aaPredicted RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 SLC7A10Q9NS82 523 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 SLC25A10Q9UBX3 287 aaPredicted RBP3.54□□□□□ -1.84
SMC4-227ENST00000497984 HSF4Q9ULV5 492 aa3.54□□□□□ -1.84
SMC4-227ENST00000497984 EIF3DO15371 548 aaKnown RBP eCLIP3.53□□□□□ -1.842e-16■■■■■ 56.2
SMC4-227ENST00000497984 ARHGEF9O43307 516 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 ARCN1P48444 511 aaKnown RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 CSRP3P50461 194 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 TAS2R38P59533 333 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 CSNK2A1P68400 391 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 SORDQ00796 357 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 FOXM1Q08050 763 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 SPOCK1Q08629 439 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 FOXD4Q12950 439 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 BIRC3Q13489 604 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 ITGA9Q13797 1035 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 CAMK1Q14012 370 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 TMEM187Q14656 261 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 PPP2R5BQ15173 497 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 ZNF704Q6ZNC4 412 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 ANO5Q75V66 913 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 CSNK2A3Q8NEV1 391 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 SENP5Q96HI0 755 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 LBHD1Q9BQE6 289 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 FUZQ9BT04 418 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 SEBOXQ9HB31 216 aaPredicted RBP3.53□□□□□ -1.84
SMC4-227ENST00000497984 LUZP4Q9P127 313 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 GJD2Q9UKL4 321 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 ACAD8Q9UKU7 415 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 TBX20Q9UMR3 447 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 ERVK-11Q9UQG0 969 aa3.53□□□□□ -1.84
SMC4-227ENST00000497984 A0A0J9YWU9 116 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 TCERG1O14776 1098 aaKnown RBP3.52□□□□□ -1.85
SMC4-227ENST00000497984 HOXC11O43248 304 aaPredicted RBP3.52□□□□□ -1.85
SMC4-227ENST00000497984 EGFP01133 1207 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 AHRP35869 848 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 GABRB2P47870 512 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 CDH15P55291 814 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 NFIL3Q16649 462 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 PQLC2Q6ZP29 291 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 RRM2BQ7LG56 351 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 ZNF440Q8IYI8 595 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 THAP6Q8TBB0 222 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 MAELQ96JY0 434 aaKnown RBP3.52□□□□□ -1.85
SMC4-227ENST00000497984 POM121L2Q96KW2 1035 aa3.52□□□□□ -1.85
SMC4-227ENST00000497984 TRIM15Q9C019 465 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms