RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 ATAD3CQ5T2N8 411 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 RBM23Q86U06 439 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 ISL2Q96A47 359 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 MEAF6Q9HAF1 191 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 RPRD1BQ9NQG5 326 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 RABL2AQ9UBK7 228 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 FXYD1O00168 92 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 SLC1A7O00341 560 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 AP3D1O14617 1153 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 ABCB1P08183 1280 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 KRT6CP48668 564 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 HMGCS2P54868 508 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 DIO3P55073 304 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 OR4D2P58180 307 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 LAPTM4AQ15012 233 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 RBM20Q5T481 1227 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 TTC23Q5W5X9 447 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 GLYATQ6IB77 296 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 BEND7Q8N7W2 519 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 GOLM1Q8NBJ4 401 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 TRAPPC12Q8WVT3 735 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 HPDLQ96IR7 371 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 MRPL57Q9BQC6 102 aaKnown RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 SMOC2Q9H3U7 446 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
GAPVD1-220ENST00000497580 LOC100506127A0A0U1RQW1 187 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 TTC34A8MYJ7 566 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 CENPBD1B2RD01 187 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SPATA31C2B4DYI2 1134 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 G3V2T6 193 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 H0YAE9 185 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 IPO13O94829 963 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PGLSO95336 258 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 APBA3O96018 575 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 ARNTP27540 789 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SULT1E1P49888 294 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 OR2B6P58173 313 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 CHRNB3Q05901 458 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 TRAF3Q13114 568 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SIM2Q14190 667 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 MFSD6LQ8IWD5 586 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 IPMKQ8NFU5 416 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 RHOXF1Q8NHV9 184 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 ITFG1Q8TB96 612 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PPP1R13LQ8WUF5 828 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 TLR9Q9NR96 1032 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 INTS7Q9NVH2 962 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PIP5K1BO14986 540 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 HCRTO43612 131 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 GPX3P22352 226 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 KCNK10P57789 538 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PITX1P78337 314 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SOWAHAQ2M3V2 549 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PLA2G4EQ3MJ16 856 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 UGT3A2Q3SY77 523 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 ESRP1Q6NXG1 681 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 GADL1Q6ZQY3 521 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SLC26A9Q7LBE3 791 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 RNF139Q8WU17 664 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 HDAC2Q92769 488 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 VMP1Q96GC9 406 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PPM1MQ96MI6 270 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 OR2B2Q9GZK3 357 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 FAM118AQ9NWS6 357 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 RBBP6Q7Z6E9 1792 aaKnown RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 JCHAINP01591 159 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 CAPN1P07384 714 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 KCNA2P16389 499 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 PRMT9Q6P2P2 845 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 OR10Q1Q8NGQ4 319 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 SLC2A6Q9UGQ3 507 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
GAPVD1-220ENST00000497580 RGS13O14921 159 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 TMCC2O75069 709 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 CYP7B1O75881 506 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 AP2A1O95782 977 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 ANGPTL1O95841 491 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 HSD17B1P14061 328 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 MTPNP58546 118 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 TJAP1Q5JTD0 557 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 ARHGAP36Q6ZRI8 547 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 ZBTB8OSQ8IWT0 167 aa13□□□□□ -0.33
GAPVD1-220ENST00000497580 FRS2Q8WU20 508 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms