RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CATSPEREQ5SY80 951 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ATAD3BQ5T9A4 648 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NOTUMQ6P988 496 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NPNTQ6UXI9 565 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 OVCH1Q7RTY7 1134 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CAMKMTQ7Z624 323 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NEK8Q86SG6 692 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM131BQ86XD5 332 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NELFCDQ8IXH7 590 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM126BQ8IXS8 530 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 KRT78Q8N1N4 520 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 BANPQ8N9N5 519 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 KYQ8NBH2 561 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SPATA20Q8TB22 786 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC13A3Q8WWT9 602 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ST8SIA4Q92187 359 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 AKAP1Q92667 903 aaKnown RBP eCLIP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TNFRSF14Q92956 283 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PHKBQ93100 1093 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FBXW5Q969U6 566 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MUL1Q969V5 352 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SLC25A36Q96CQ1 311 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 UHRF1Q96T88 793 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CITED2Q99967 270 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SEC22CQ9BRL7 303 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 OR51V1Q9H2C8 321 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 HSD3B7Q9H2F3 369 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 BLZF1Q9H2G9 400 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 LRMDAQ9H2I8 198 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 DHX33Q9H6R0 707 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 C10orf88Q9H8K7 445 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 VIPAS39Q9H9C1 493 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MRPS30Q9NP92 439 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 OBP2BQ9NPH6 170 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 DNAJC11Q9NVH1 559 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 THG1LQ9NWX6 298 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TMOD2Q9NZR1 351 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CTTNBP2NLQ9P2B4 639 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ARHGAP20Q9P2F6 1191 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 COPG2Q9UBF2 871 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SRPRBQ9Y5M8 271 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GMPPBQ9Y5P6 360 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 KLF2Q9Y5W3 355 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GPR45Q9Y5Y3 372 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 A0A0U1RQV5 110 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SH3PXD2BA1X283 911 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 C5orf51A6NDU8 294 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PRR23AA6NEV1 266 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 WRBO00258 174 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RFXAPO00287 272 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 AQP7O14520 342 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 AIM2O14862 343 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PGRMC2O15173 223 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TO15178 435 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NUDT21O43809 227 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GMFGO60234 142 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GPRIN2O60269 458 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TMEM63AO94886 807 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 SUN1O94901 812 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CDK14O94921 469 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NSA2O95478 260 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FABP1P07148 127 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PLEKP08567 350 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 IGFBP1P08833 259 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 COX5BP10606 129 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CCDC130P13994 396 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CTSSP25774 331 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 G0S2P27469 103 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CDH5P33151 784 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 THPOP40225 353 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 NNMTP40261 264 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ALDH9A1P49189 494 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 GNG10P50151 68 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 BCAP31P51572 246 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 AP2S1P53680 142 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RPS3AP61247 264 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RPL10AP62906 217 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 XIAPP98170 497 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TLE2Q04725 743 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 LRRC32Q14392 662 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PRKD1Q15139 912 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PTPRRQ15256 657 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CNN3Q15417 329 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MCMDC2Q4G0Z9 681 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ZC2HC1CQ53FD0 456 aaPredicted RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 EMC4Q5J8M3 183 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PAGE2BQ5JRK9 111 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 MANEAQ5SRI9 462 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ALS2CLQ60I27 953 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 PYHIN1Q6K0P9 492 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TRMT10BQ6PF06 316 aaKnown RBP3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 DENND5BQ6ZUT9 1274 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 RRAGAQ7L523 313 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TAC4Q86UU9 113 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TBC1D10CQ8IV04 446 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 DENND1CQ8IV53 801 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 TUSC5Q8IXB3 177 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 CCDC105Q8IYK2 499 aa3.1□□□□□ -1.91
SNRNP48-202ENST00000496946 ZBED8Q8IZ13 594 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms