RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZXDBP98169 803 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 MMEL1Q495T6 779 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 FAM219BQ5XKK7 198 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 STK40Q8N2I9 435 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 SIDT2Q8NBJ9 832 aaKnown RBP12.97□□□□□ -0.33
GARNL3-220ENST00000496711 CD200R1Q8TD46 325 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 KCNJ9Q92806 393 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 FUBP1Q96AE4 644 aaKnown RBP12.97□□□□□ -0.33
GARNL3-220ENST00000496711 NSUN5Q96P11 429 aaKnown RBP12.97□□□□□ -0.33
GARNL3-220ENST00000496711 SLC25A23Q9BV35 468 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 C2orf49Q9BVC5 232 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-220ENST00000496711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.97□□□□□ -0.33
GARNL3-220ENST00000496711 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 CACNA2D2Q9NY47 1150 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 CCDC167Q9P0B6 97 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 ADAMTS6Q9UKP5 1117 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 TMCO1Q9UM00 188 aa12.97□□□□□ -0.33
GARNL3-220ENST00000496711 ATP6AP2A0A1C7CYW4 349 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 E5RI56 91 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 CDC7O00311 574 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 TEX28O15482 410 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 KLK8O60259 260 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 ATP6AP2O75787 350 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 MT-CO1P00395 513 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 ESR1P03372 595 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 SNRPB2P08579 225 aaKnown RBP12.96□□□□□ -0.33
GARNL3-220ENST00000496711 PTGER3P43115 390 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 ADARP55265 1226 aaKnown RBP12.96□□□□□ -0.33
GARNL3-220ENST00000496711 CREMQ03060 361 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 CLCQ05315 142 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 CACNG1Q06432 222 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 PTPRRQ15256 657 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 GSTA3Q16772 222 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 ARMC12Q5T9G4 340 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 ANKS6Q68DC2 871 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 RETSATQ6NUM9 610 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 MICAL1Q8TDZ2 1067 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 TRPC4APQ8TEL6 797 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 DLG3Q92796 817 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 LINGO1Q96FE5 620 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 C3orf30Q96M34 536 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 SLC30A3Q99726 388 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 GPR63Q9BZJ6 419 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 IL17CQ9P0M4 197 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 GALPQ9UBC7 116 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 PSMD13Q9UNM6 376 aa12.96□□□□□ -0.33
GARNL3-220ENST00000496711 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TRIM38O00635 465 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PPP6CO00743 305 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 FBP2O00757 339 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CASQ2O14958 399 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PIP5K1BO14986 540 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PGLSO95336 258 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TSPAN12O95859 305 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ALDOCP09972 364 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PEX2P28328 305 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 GABRR2P28476 465 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PPM1AP35813 382 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 HMGCLP35914 325 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ACADVLP49748 655 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 FOXA1P55317 472 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 IL2P60568 153 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PSME3P61289 254 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 XIAPP98170 497 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CYP4F8P98187 520 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 LRP8Q14114 963 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TRIP10Q15642 601 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 EML3Q32P44 896 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ZFP1Q6P2D0 407 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TAS2R42Q7RTR8 314 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 LYSMD3Q7Z3D4 306 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PDSS2Q86YH6 399 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 BHLHE22Q8NFJ8 381 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 DDI1Q8WTU0 396 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 MRPS31Q92665 395 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 BHMTQ93088 406 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 C1QTNF3Q9BXJ4 246 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TM6SF2Q9BZW4 377 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 KLHL4Q9C0H6 718 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ZDHHC7Q9NXF8 308 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 SARDHQ9UL12 918 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PCDHGA7Q9Y5G6 932 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 SLC30A1Q9Y6M5 507 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 A0A0U1RQS6 177 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 MRASO14807 208 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CKMP06732 381 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CLTBP09497 229 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CTPS1P17812 591 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CHRM3P20309 590 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PSMD8P48556 350 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms