RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 FAM169AQ9Y6X4 670 aa13.41□□□□□ -0.26
PTPN7-218ENST00000496197 MAGEB16A2A368 324 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 AGAP14A8MT82 685 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 MTX2O75431 263 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 C1QAP02745 245 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 TSHRP16473 764 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 GPR1P46091 355 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 TUBB4BP68371 445 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 CDK3Q00526 305 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 NFATC2Q13469 925 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 CCDC6Q16204 474 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 KYAT3Q6YP21 454 aaKnown RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 NLRP9Q7RTR0 991 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 PTAR1Q7Z6K3 402 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 NLRP8Q86W28 1048 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 RUBCNQ92622 972 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 PRRX2Q99811 253 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 ZSCAN5AQ9BUG6 496 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 C1QTNF7Q9BXJ2 289 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 TEX101Q9BY14 249 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 SMOC1Q9H4F8 434 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 ASB8Q9H765 288 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 FSCN3Q9NQT6 498 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 SMYD2Q9NRG4 433 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 AASDHPPTQ9NRN7 309 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 GPR27Q9NS67 375 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
PTPN7-218ENST00000496197 SMG5Q9UPR3 1016 aaKnown RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 PCYT1BQ9Y5K3 369 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-218ENST00000496197 TDRD6O60522 2096 aaKnown RBP13.4□□□□□ -0.27
PTPN7-218ENST00000496197 PIKFYVEQ9Y2I7 2098 aa13.4□□□□□ -0.27
PTPN7-218ENST00000496197 LAMA1P25391 3075 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 TRBV5-4A0A0C4DH59 114 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 FPGTO14772 594 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 POLBP06746 335 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ERVK-10P10266 1014 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 CSNK1EP49674 416 aaKnown RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 RACK1P63244 317 aaKnown RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 PRAMEP78395 509 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 BNC1Q01954 994 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 LAMB3Q13751 1172 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 PDE1CQ14123 709 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 KYNUQ16719 465 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ZRANB3Q5FWF4 1079 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 WDR45BQ5MNZ6 344 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ZC3H14Q6PJT7 736 aaKnown RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ADAMTSL4Q6UY14 1074 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 Q6ZSR6 202 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 RELL1Q8IUW5 271 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 EIF1ADQ8N9N8 165 aaKnown RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 OR6P1Q8NGX9 317 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ZNF398Q8TD17 642 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 PIGKQ92643 395 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ATOH1Q92858 354 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 COX14Q96I36 57 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 PHOX2BQ99453 314 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 APOOQ9BUR5 198 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 CDH19Q9H159 772 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 SEMA4AQ9H3S1 761 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 APPL1Q9UKG1 709 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
PTPN7-218ENST00000496197 ZFC3H1O60293 1989 aaKnown RBP13.39□□□□□ -0.27
PTPN7-218ENST00000496197 TMEM202A6NGA9 273 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 A6NNZ2 444 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 BCAT2O15382 392 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-218ENST00000496197 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
PTPN7-218ENST00000496197 EPN2O95208 641 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 FUCA1P04066 466 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 CD38P28907 300 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 NUDT1P36639 197 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 PTPN5P54829 565 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 B4GALNT1Q00973 533 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 STAT4Q14765 748 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 ZNF789Q5FWF6 425 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 ARMC3Q5W041 872 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 ZDHHC20Q5W0Z9 365 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 AFTPHQ6ULP2 937 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 SNX20Q7Z614 316 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 KCNMB4Q86W47 210 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 SPATS2Q86XZ4 545 aaKnown RBP13.38□□□□□ -0.27
PTPN7-218ENST00000496197 DENND6AQ8IWF6 608 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 OR4L1Q8NH43 312 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 DTX3LQ8TDB6 740 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 BTN2A2Q8WVV5 523 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 GLYATL1Q969I3 302 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 CERS2Q96G23 380 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 VPS35Q96QK1 796 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 NAT9Q9BTE0 207 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 BOCQ9BWV1 1114 aa13.38□□□□□ -0.27
PTPN7-218ENST00000496197 WDR26Q9H7D7 661 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms