RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CARD9Q9H257 536 aa24.04■■□□□ 1.44
HLA-C-209ENST00000495835 GOLPH3Q9H4A6 298 aa24.04■■□□□ 1.44
HLA-C-209ENST00000495835 PRORYQ9H606 182 aa24.04■■□□□ 1.44
HLA-C-209ENST00000495835 SUDS3Q9H7L9 328 aaPredicted RBP24.04■■□□□ 1.44
HLA-C-209ENST00000495835 FAM153AQ9UHL3 310 aa24.04■■□□□ 1.44
HLA-C-209ENST00000495835 PCDHA3Q9Y5H8 950 aa24.04■■□□□ 1.44
HLA-C-209ENST00000495835 CACNA1GO43497 2377 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 CASC3O15234 703 aaKnown RBP24.03■■□□□ 1.44
HLA-C-209ENST00000495835 INPP4BO15327 924 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 CPNE6O95741 557 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 MT-CYBP00156 380 aaPredicted RBP24.03■■□□□ 1.44
HLA-C-209ENST00000495835 CTNNA1P35221 906 aaKnown RBP24.03■■□□□ 1.44
HLA-C-209ENST00000495835 CCDC173Q0VFZ6 552 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 WASHC5Q12768 1159 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 SQSTM1Q13501 440 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 BROXQ5VW32 411 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 B3GNT8Q7Z7M8 397 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 SFTPA2Q8IWL1 248 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 FBXO39Q8N4B4 442 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 SPATA22Q8NHS9 363 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 EID2BQ96D98 161 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 GPR63Q9BZJ6 419 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 TRABDQ9H4I3 376 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 EPB41L5Q9HCM4 733 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 TRHDEQ9UKU6 1024 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 ZNF711Q9Y462 761 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 PCDHGA7Q9Y5G6 932 aa24.03■■□□□ 1.44
HLA-C-209ENST00000495835 LOC285095A0A1B0GVY8 99 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 CCDC66A2RUB6 948 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 SOWAHDA6NJG2 315 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 FADS2P1A8MWK0 482 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 APOC4-APOC2K7ER74 178 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 B4GAT1O43505 415 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 TNFSF15O95150 251 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 APOC2P02655 101 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 TNNT3P45378 269 aaPredicted RBP24.02■■□□□ 1.44
HLA-C-209ENST00000495835 MAZP56270 477 aaKnown RBP24.02■■□□□ 1.44
HLA-C-209ENST00000495835 ADCY2Q08462 1091 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 BIRC2Q13490 618 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 PCSK7Q16549 785 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 KDELC2Q7Z4H8 507 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 TRIM74Q86UV6 250 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 PIM3Q86V86 326 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 TRAM1L1Q8N609 369 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 KCNE4Q8WWG9 221 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 HTR3CQ8WXA8 447 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 FCRL5Q96RD9 977 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 DPYSL5Q9BPU6 564 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 FERMT1Q9BQL6 677 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 ZNHIT2Q9UHR6 403 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 SSUH2Q9Y2M2 353 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 PTPRQQ9UMZ3 2332 aa24.02■■□□□ 1.44
HLA-C-209ENST00000495835 PJA2O43164 708 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 ATP1A1P05023 1023 aaKnown RBP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 CD68P34810 354 aaPredicted RBP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 PTPN7P35236 360 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 FASLGP48023 281 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 MARK2Q7KZI7 788 aaKnown RBP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 ZC3H18Q86VM9 953 aaKnown RBP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 SLITRK4Q8IW52 837 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 GPR26Q8NDV2 337 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 DTX3LQ8TDB6 740 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 QKIQ96PU8 341 aaKnown RBP eCLIP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 SPATA16Q9BXB7 569 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 TRIM39Q9HCM9 518 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 TFR2Q9UP52 801 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 SHOC2Q9UQ13 582 aa24.01■■□□□ 1.43
HLA-C-209ENST00000495835 OAS3Q9Y6K5 1087 aaKnown RBP24.01■■□□□ 1.43
HLA-C-209ENST00000495835 NUAK1O60285 661 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 PMPCBO75439 489 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 ZNF189O75820 626 aaPredicted RBP24■■□□□ 1.43
HLA-C-209ENST00000495835 SLC2A4P14672 509 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 UGT1A5P35504 534 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 HMGCLP35914 325 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 CETN2P41208 172 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 MARCKSL1P49006 195 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 CLCNKAP51800 687 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 ZNF569Q5MCW4 686 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 ZDHHC20Q5W0Z9 365 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 B4GALNT4Q76KP1 1039 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 PID1Q7Z2X4 250 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 TXLNBQ8N3L3 684 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 KRT35Q92764 455 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 PLEKHG4BQ96PX9 1271 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 CMKLR1Q99788 373 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 FOXP3Q9BZS1 431 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 B3GNT4Q9C0J1 378 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 HACD3Q9P035 362 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 KLHL8Q9P2G9 620 aaPredicted RBP24■■□□□ 1.43
HLA-C-209ENST00000495835 ACSL6Q9UKU0 697 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 PLEKHM1Q9Y4G2 1056 aa24■■□□□ 1.43
HLA-C-209ENST00000495835 RCCD1A6NED2 376 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 SLC25A14O95258 325 aaPredicted RBP23.99■■□□□ 1.43
HLA-C-209ENST00000495835 NFKB1P19838 968 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 CTNNA2P26232 953 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 ALDH4A1P30038 563 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 VAV2P52735 878 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 MPP3Q13368 585 aa23.99■■□□□ 1.43
HLA-C-209ENST00000495835 FOXR1Q6PIV2 292 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms