RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TTC30AQ86WT1 665 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 SFTPA1Q8IWL2 248 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 SCN4BQ8IWT1 228 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 CCDC65Q8IXS2 484 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ABCA7Q8IZY2 2146 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 FRMD1Q8N878 549 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 DEFB124Q8NES8 71 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 RLN3Q8WXF3 142 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 POMGNT1Q8WZA1 660 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 PIGKQ92643 395 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ATP2A3Q93084 1043 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 CCDC47Q96A33 483 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 CNOT6LQ96LI5 555 aaKnown RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 TRIM9Q9C026 710 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 ST6GALNAC4Q9H4F1 302 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 TMEM206Q9H813 350 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 MAGEF1Q9HAY2 307 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 TMEM9BQ9NQ34 198 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 SERHLQ9NQF3 203 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 LRIT1Q9P2V4 623 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 UXTQ9UBK9 157 aaPredicted RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 MAN1B1Q9UKM7 699 aa6.72□□□□□ -1.33
VIM-207ENST00000495528 NUP210Q8TEM1 1887 aaPredicted RBP6.72□□□□□ -1.33
VIM-207ENST00000495528 SCN1AP35498 2009 aa6.71□□□□□ -1.33
VIM-207ENST00000495528 KIF26AQ9ULI4 1882 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 SPAG17Q6Q759 2223 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 PVALEFA0A1B0GWK0 134 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 MBD3L4A6NDZ8 208 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 MBD3L3A6NE82 208 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 SRRM3A6NNA2 597 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 VWC2LB2RUY7 222 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 HUS1O60921 280 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ATP2C2O75185 946 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 IL18RAPO95256 599 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 NFATC1O95644 943 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ABCD1P33897 745 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 PNPLA4P41247 253 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 PRIM2P49643 509 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 INHBCP55103 352 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 TFAMQ00059 246 aaKnown RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 MYL7Q01449 175 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 TBCCQ15814 346 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 SOWAHAQ2M3V2 549 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 CFAP221Q4G0U5 840 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 KAZNQ674X7 775 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 SFRP4Q6FHJ7 346 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 FAM171BQ6P995 826 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 UNC13DQ70J99 1090 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 GAS2L3Q86XJ1 694 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 SPATA2LQ8IUW3 424 aaPredicted RBP6.71□□□□□ -1.34
VIM-207ENST00000495528 TMEM86AQ8N2M4 240 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 FAM109AQ8N4B1 249 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 CSGALNACT2Q8N6G5 542 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 AMER2Q8N7J2 671 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 GPR150Q8NGU9 434 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 CCDC26Q8TAB7 109 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 OLIG1Q8TAK6 271 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ACTRT2Q8TDY3 377 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 SAAL1Q96ER3 474 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ZNF560Q96MR9 790 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 GSDMAQ96QA5 445 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 FNBP1Q96RU3 617 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 FAM213AQ9BRX8 229 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ANP32EQ9BTT0 268 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 STRA6Q9BX79 667 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 CXorf36Q9H7Y0 433 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 PNPLA8Q9NP80 782 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 PACSIN3Q9UKS6 424 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 MMP17Q9ULZ9 603 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 ARHGAP26Q9UNA1 814 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 SNX9Q9Y5X1 595 aa6.71□□□□□ -1.34
VIM-207ENST00000495528 GOLGA8IPA6NC78 632 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 POM121BA6NF01 834 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 GOLGA8JA6NMD2 632 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 SGK1O00141 431 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 RAB27BO00194 218 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 PROM1O43490 865 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 KLF8O95600 359 aaPredicted RBP6.7□□□□□ -1.34
VIM-207ENST00000495528 KRT19P08727 400 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 GAP43P17677 238 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 LMO2P25791 158 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 P2RY2P41231 377 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 PTGER3P43115 390 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 LHX1P48742 406 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 NXPH1P58417 271 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 MRPS21P82921 87 aaKnown RBP6.7□□□□□ -1.34
VIM-207ENST00000495528 DPTQ07507 201 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 STK4Q13043 487 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 MORC3Q14149 939 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 KCNB1Q14721 858 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 LONRF1Q17RB8 773 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 DEPDC1Q5TB30 811 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 KLHDC7AQ5VTJ3 777 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 CACHD1Q5VU97 1274 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 RHBDF2Q6PJF5 856 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 RBM43Q6ZSC3 357 aaKnown RBP6.7□□□□□ -1.34
VIM-207ENST00000495528 KCTD20Q7Z5Y7 419 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 SFR1Q86XK3 245 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms