RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 OR1N1Q8NGS0 311 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 TM9SF4Q92544 642 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 ALPK1Q96QP1 1244 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 OR2M4Q96R27 311 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SGPP1Q9BX95 441 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 OSBPL1AQ9BXW6 950 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 UCK2Q9BZX2 261 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 WASH6PQ9NQA3 447 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 C1GALT1Q9NS00 363 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SAMSN1Q9NSI8 373 aaKnown RBP8.75□□□□□ -1.01
GARNL3-219ENST00000495172 SEC14L3Q9UDX4 400 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 CCDC39Q9UFE4 941 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 KCNK6Q9Y257 313 aa8.75□□□□□ -1.01
GARNL3-219ENST00000495172 H7C1Q1 480 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 SLC19A2O60779 497 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 CUTAO60888 179 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 TMCC1O94876 653 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 FBXO21O94952 628 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 VDRP11473 427 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 NELFEP18615 380 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 AGAP20933 346 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 DNASE1P24855 282 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 MARSP56192 900 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 PPP2R2BQ00005 443 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 CDK3Q00526 305 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 PMP22Q01453 160 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 ELP6Q0PNE2 266 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 LRMPQ12912 555 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 MYBPHQ13203 477 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 POLD3Q15054 466 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 ACOX1Q15067 660 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 KNOP1Q1ED39 458 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 HMBOX1Q6NT76 420 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 IRGCQ6NXR0 463 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 IYDQ6PHW0 289 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 LINC00696Q6ZRV3 163 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 RFLNAQ6ZTI6 216 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 SETD3Q86TU7 594 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 TMEM126BQ8IUX1 230 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 KLHL6Q8WZ60 621 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 ISG20Q96AZ6 181 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 SDCCAG3Q96C92 435 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 KCNK17Q96T54 332 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 GPATCH1Q9BRR8 931 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 NLNQ9BYT8 704 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 KLC2Q9H0B6 622 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 BLZF1Q9H2G9 400 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 POPDC2Q9HBU9 364 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 SARS2Q9NP81 518 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 SCHIP1Q9P0W5 487 aaPredicted RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 CNOT8Q9UFF9 292 aaKnown RBP8.74□□□□□ -1.01
GARNL3-219ENST00000495172 ATP8A1Q9Y2Q0 1164 aa8.74□□□□□ -1.01
GARNL3-219ENST00000495172 PCM1Q15154 2024 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 FAM170AA1A519 330 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 ILVBLA1L0T0 632 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 DRGXA6NNA5 263 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 FAM90A27PA6NNH2 459 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 E5RJQ4 531 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 MEN1O00255 615 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 CPNE3O75131 537 aaKnown RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 UBXN7O94888 489 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 F12P00748 615 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 ELFN1P0C7U0 828 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 HOXC12P31275 282 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 EPHA4P54764 986 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 NRG1Q02297 640 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 SLC20A2Q08357 652 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 ABRQ12979 859 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 DENND1BQ6P3S1 775 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 C16orf47Q6ZP98 133 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 CAMK1DQ8IU85 385 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 DSELQ8IZU8 1212 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 SIDT2Q8NBJ9 832 aaKnown RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 ACRBPQ8NEB7 543 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 TEX101Q9BY14 249 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 TTYH3Q9C0H2 523 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 DNAI2Q9GZS0 605 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 PHPT1Q9NRX4 125 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 PIGVQ9NUD9 493 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 P4HTMQ9NXG6 502 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 PLA2G3Q9NZ20 509 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 CPNE7Q9UBL6 633 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 TRPS1Q9UHF7 1281 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 ZNHIT2Q9UHR6 403 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 FBXO2Q9UK22 296 aaPredicted RBP8.73□□□□□ -1.01
GARNL3-219ENST00000495172 SLC17A4Q9Y2C5 497 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 MEMO1Q9Y316 297 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 CLIC4Q9Y696 253 aa8.73□□□□□ -1.01
GARNL3-219ENST00000495172 MAPK13O15264 365 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 KLF7O75840 302 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 IPO13O94829 963 aaKnown RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 NR3C1P04150 777 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 IVLP07476 585 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 RAB40ALP0C0E4 278 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 AMD1P17707 334 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 ERCC5P28715 1186 aaPredicted RBP8.72□□□□□ -1.01
GARNL3-219ENST00000495172 SPAM1P38567 509 aa8.72□□□□□ -1.01
GARNL3-219ENST00000495172 YWHAZP63104 245 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms