RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 EEDO75530 441 aaKnown RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 PAMP19021 973 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 EIF4EBP2Q13542 120 aaPredicted RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 OR4D1Q15615 310 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 PARP8Q8N3A8 854 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 ERLEC1Q96DZ1 483 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 ZNF560Q96MR9 790 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 WDCPQ9H6R7 721 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 MARCH4Q9P2E8 410 aaPredicted RBP15.3■□□□□ 0.04
SDF4-207ENST00000494748 NEUROG3Q9Y4Z2 214 aa15.3■□□□□ 0.04
SDF4-207ENST00000494748 NOL3O60936 208 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 GPR32O75388 356 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 S1PR4O95977 384 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 CD4P01730 458 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 HGFP14210 728 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ALDH3A2P51648 485 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 GEMP55040 296 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 OR4D2P58180 307 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 VGLL4Q14135 290 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SEPT6Q14141 434 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 TTLL4Q14679 1199 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 CTU2Q2VPK5 515 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 SULF1Q8IWU6 871 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 LEMD2Q8NC56 503 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 MUL1Q969V5 352 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 MBOAT4Q96T53 435 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 MID1IP1Q9NPA3 183 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 INTS7Q9NVH2 962 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 GPRC5DQ9NZD1 345 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 BTRCQ9Y297 605 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 GIT1Q9Y2X7 761 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ST14Q9Y5Y6 855 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 DGKBQ9Y6T7 804 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 PTPRDP23468 1912 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 MATN3O15232 486 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 USP2O75604 605 aaPredicted RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 LINC00032P0C843 101 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 PCMT1P22061 227 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 TGM1P22735 817 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ARL13BQ3SXY8 428 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ZNF549Q6P9A3 640 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 TAC4Q86UU9 113 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SNX29P2Q8IUI4 249 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 TOP6BLQ8N6T0 577 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SEPHS2Q99611 448 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 PRKD2Q9BZL6 878 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SLC39A8Q9C0K1 460 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SEPT3Q9UH03 358 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ENPP5Q9UJA9 477 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ITGB1BP2Q9UKP3 347 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ZNF24P17028 368 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 HTR1EP28566 365 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 SLC26A3P40879 764 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ARSDP51689 593 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ZNF135P52742 658 aaPredicted RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 EEFSECP57772 596 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 SKIV2LQ15477 1246 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 RBM48Q5RL73 367 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 PTGR2Q8N8N7 351 aaPredicted RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 TSPEARQ8WU66 669 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 ZC3H15Q8WU90 426 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 TSPAN17Q96FV3 270 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 BTBD2Q9BX70 525 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 CARS2Q9HA77 564 aaKnown RBP15.29■□□□□ 0.04
SDF4-207ENST00000494748 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 CNGB3Q9NQW8 809 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 NAALAD2Q9Y3Q0 740 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 PCDHGA8Q9Y5G5 932 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 V9GYQ6 96 aa15.29■□□□□ 0.04
SDF4-207ENST00000494748 CNOT3O75175 753 aaKnown RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 C1RP00736 705 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 ALBP02768 609 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 KCNE1P15382 129 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 LBPP18428 481 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 IL12AP29459 219 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 GP2P55259 537 aaKnown RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 PIGFQ07326 219 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 NFYCQ13952 458 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 TRIM16LQ309B1 348 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 WSCD1Q658N2 575 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 CHDHQ8NE62 594 aaPredicted RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 OR52K2Q8NGK3 314 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 OSCP1Q8WVF1 389 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 PAK1IP1Q9NWT1 392 aaPredicted RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 UBXN8O00124 270 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 CCL22O00626 93 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 KPNA4O00629 521 aaPredicted RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 XYLBO75191 536 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 PNPLA4P41247 253 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 ECT2LQ008S8 904 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 DAG1Q14118 895 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 SNX17Q15036 470 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
SDF4-207ENST00000494748 MFSD4AQ8N468 514 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 TMCO5AQ8N6Q1 288 aa15.28■□□□□ 0.04
SDF4-207ENST00000494748 TMBIM1Q969X1 311 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms