RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 THSD7BQ9C0I4 1608 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 ILVBLA1L0T0 632 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 LCHNA4D1U4 455 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SNAP91O60641 907 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 NIPSNAP2O75323 286 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 STC2O76061 302 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SEC24AO95486 1093 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 FESP07332 822 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 CHRM3P20309 590 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 LPOP22079 712 aaPredicted RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 TUFMP49411 452 aaKnown RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 ATP4BP51164 291 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 RPL26P61254 145 aaKnown RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 CDKL1Q00532 357 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 RHDQ02161 417 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 ILF2Q12905 390 aaKnown RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 GRM2Q14416 872 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 TAF12Q16514 161 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SLC30A9Q6PML9 568 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 TICAM1Q8IUC6 712 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 TMEM126BQ8IUX1 230 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 MIER2Q8N344 545 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 MARVELD2Q8N4S9 558 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 PCYOX1LQ8NBM8 494 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SMPD4Q9NXE4 827 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 MAP10Q9P2G4 905 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 RAB26Q9ULW5 256 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 SNX13Q9Y5W8 968 aa11.15□□□□□ -0.63
CHMP3-209ENST00000494623 ANKRD66B4E2M5 251 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 AHCYL1O43865 530 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PGM3O95394 542 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 INHAP05111 366 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PKMP14618 531 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 LBPP18428 481 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PRDX3P30048 256 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 ATP6V0D1P61421 351 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 TRAP1Q12931 704 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 LCP2Q13094 533 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 BFSP2Q13515 415 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 KIAA1841Q6NSI8 718 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 TAS2R42Q7RTR8 314 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 HERC6Q8IVU3 1022 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PIP4K2CQ8TBX8 421 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 FUBP1Q96AE4 644 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 SLCO4A1Q96BD0 722 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 SCLYQ96I15 445 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 BIRC8Q96P09 236 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 TRPM5Q9NZQ8 1165 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 POLG2Q9UHN1 485 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 APPL1Q9UKG1 709 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 C2orf78A6NCI8 922 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 ANGPT2O15123 496 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 STX7O15400 261 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 MYCP01106 439 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 F11P03951 625 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PYGLP06737 847 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 DIO3P55073 304 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 CAPRIN1Q14444 709 aaKnown RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 IYDQ6PHW0 289 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 AMIGO2Q86SJ2 522 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 DHFR2Q86XF0 187 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 PHYKPLQ8IUZ5 450 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 EEF1AKMT1Q8WVE0 214 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 TCF12Q99081 682 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 ADGRE3Q9BY15 652 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 COQ10BQ9H8M1 238 aa11.14□□□□□ -0.63
CHMP3-209ENST00000494623 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
CHMP3-209ENST00000494623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ZNF839A8K0R7 811 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 IQCF5A8MTL0 148 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 GPR39O43194 453 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 VPS26AO75436 327 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 STAMBPO95630 424 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 C8BP07358 591 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 PIM1P11309 404 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 CAPN3P20807 821 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ARF5P84085 180 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TWF1Q12792 350 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TRAF2Q12933 501 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 PLD1Q13393 1074 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 RBBP7Q16576 425 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 CNPY1Q3B7I2 92 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 C6orf10Q5SRN2 563 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ADGRF1Q5T601 910 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 C8orf82Q6P1X6 216 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 CARNMT1Q8N4J0 409 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 NKAPQ8N5F7 415 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 DCBLD1Q8N8Z6 715 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 PDZD8Q8NEN9 1154 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ZNF483Q8TF39 744 aaPredicted RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 BHMTQ93088 406 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 TOP1MTQ969P6 601 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 PPWD1Q96BP3 646 aaKnown RBP11.13□□□□□ -0.63
CHMP3-209ENST00000494623 ROPN1LQ96C74 230 aa11.13□□□□□ -0.63
CHMP3-209ENST00000494623 LINGO1Q96FE5 620 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms