RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 GRSF1Q12849 480 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMC4-224ENST00000494612 LRMPQ12912 555 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 GRIK2Q13002 908 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 STK4Q13043 487 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 KCTD2Q14681 263 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 CTF1Q16619 201 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 PNLIPRP3Q17RR3 467 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 KRT24Q2M2I5 525 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 IGSF11Q5DX21 431 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 XKR9Q5GH70 373 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 PLEKHA7Q6IQ23 1121 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 ZNF280DQ6N043 979 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 CFAP77Q6ZQR2 320 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 AACSQ86V21 672 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 LINC00346Q8IVM7 164 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 FBXL14Q8N1E6 418 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 BEST3Q8N1M1 668 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 OR2AK2Q8NG84 335 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 HM13Q8TCT9 377 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 RHBDF1Q96CC6 855 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 EGLN2Q96KS0 407 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 PCYT2Q99447 389 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 MTMR10Q9NXD2 777 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 CWC15Q9P013 229 aaKnown RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 KCNS2Q9ULS6 477 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 CMAHPQ9Y471 501 aa4.43□□□□□ -1.7
SMC4-224ENST00000494612 BAZ1AQ9NRL2 1556 aaPredicted RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 ATXN2Q99700 1313 aaKnown RBP4.43□□□□□ -1.7
SMC4-224ENST00000494612 ARHGEF40Q8TER5 1519 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 LACTBL1A8MY62 500 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 M0QZ24 198 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 SCAMP1O15126 338 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 OGG1O15527 345 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PLRG1O43660 514 aaKnown RBP4.42□□□□□ -1.7
SMC4-224ENST00000494612 PLPP2O43688 288 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 ENTPD3O75355 529 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PRSS2P07478 247 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 NGFRP08138 427 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 HOXC6P09630 235 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PLA2G2AP14555 144 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PON1P27169 355 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 SLC15A1P46059 708 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 KCNJ4P48050 445 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 NRIP1P48552 1158 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PDLIM4P50479 330 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 SUOXP51687 545 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PGGT1BP53609 377 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 CSNK2A1P68400 391 aaPredicted RBP4.42□□□□□ -1.7
SMC4-224ENST00000494612 ADIPOQQ15848 244 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 AMZ1Q400G9 498 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 ZNF805Q5CZA5 627 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 BMP2KLQ5H9B9 411 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PMS2CLQ68D20 193 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 RGMBQ6NW40 437 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 TMCO3Q6UWJ1 677 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 SCML4Q8N228 414 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 NME8Q8N427 588 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 POC5Q8NA72 575 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 CSNK2A3Q8NEV1 391 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 NEUROG1Q92886 237 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PGAM5Q96HS1 289 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 C3orf30Q96M34 536 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 PAFAH2Q99487 392 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 SEPT5Q99719 369 aaPredicted RBP4.42□□□□□ -1.7
SMC4-224ENST00000494612 TMEM204Q9BSN7 226 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 C17orf75Q9HAS0 396 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 AGO1Q9UL18 857 aaKnown RBP4.42□□□□□ -1.7
SMC4-224ENST00000494612 SNX8Q9Y5X2 465 aa4.42□□□□□ -1.7
SMC4-224ENST00000494612 WNT9BO14905 357 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 EIF5BO60841 1220 aaKnown RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 TMCC2O75069 709 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 CLDN14O95500 239 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 AFPP02771 609 aaKnown RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 SAT1P21673 171 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 MSH2P43246 934 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 TFAP4Q01664 338 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 FOXM1Q08050 763 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 DSC1Q08554 894 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 EPS8Q12929 822 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 KCNT1Q5JUK3 1230 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 PLEKHS1Q5SXH7 462 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 KCTD18Q6PI47 426 aaPredicted RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 RHBDF2Q6PJF5 856 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 CCDC190Q86UF4 302 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 RNF168Q8IYW5 571 aaPredicted RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 ZNF34Q8IZ26 560 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 SCYL3Q8IZE3 742 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 GSDMBQ8TAX9 411 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 MIB2Q96AX9 1013 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 MTBPQ96DY7 904 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 MTERF1Q99551 399 aaKnown RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 NTPCRQ9BSD7 190 aaKnown RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 HRH4Q9H3N8 390 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 ARHGEF38Q9NXL2 777 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 CLIC5Q9NZA1 410 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 CHORDC1Q9UHD1 332 aaPredicted RBP4.41□□□□□ -1.7
SMC4-224ENST00000494612 PCDHA7Q9UN72 937 aa4.41□□□□□ -1.7
SMC4-224ENST00000494612 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms