RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZNF37AP17032 561 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 CTPS1P17812 591 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ITGB7P26010 798 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ACRV1P26436 265 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 VIPR1P32241 457 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 GMPRP36959 345 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SPAM1P38567 509 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MMP12P39900 470 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TNFRSF4P43489 277 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 KIR2DL1P43626 348 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 CLCN7P51798 805 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PGGT1BP53609 377 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 EPHB1P54762 984 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TMPRSS15P98073 1019 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 RALGDSQ12967 914 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 STX3Q13277 289 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 GBX1Q14549 363 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 E2F5Q15329 346 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 CHI3L2Q15782 390 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SEPT7Q16181 437 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 FAM83EQ2M2I3 478 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ITPRIPL2Q3MIP1 535 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ACCSLQ4AC99 568 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TAF1BQ53T94 588 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 HENMT1Q5T8I9 393 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 AGAP9Q5VTM2 703 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 LRRC66Q68CR7 880 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 LRRC8EQ6NSJ5 796 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 NAPRTQ6XQN6 538 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MACC1Q6ZN28 852 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 USP45Q70EL2 814 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MTSS1LQ765P7 747 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DPPA4Q7L190 304 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ZNF771Q7L3S4 317 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 CYP2U1Q7Z449 544 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 LDB1Q86U70 411 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 TSPAN33Q86UF1 283 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TNS4Q8IZW8 715 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 CYB5D2Q8WUJ1 264 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 KCTD4Q8WVF5 259 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MYLIPQ8WY64 445 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ATXN7L3BQ96GX2 97 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ELMO2Q96JJ3 720 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 KLHL32Q96NJ5 620 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 ATOH8Q96SQ7 321 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PAIP2Q9BPZ3 127 aaKnown RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 GATA5Q9BWX5 397 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 HDAC8Q9BY41 377 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 GPR63Q9BZJ6 419 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DERL2Q9GZP9 239 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DRC3Q9H069 523 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 MYLK2Q9H1R3 596 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 POMKQ9H5K3 350 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SYTL2Q9HCH5 934 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 GPAMQ9HCL2 828 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 CD248Q9HCU0 757 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 RAD18Q9NS91 495 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 KCNK4Q9NYG8 393 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TAS2R13Q9NYV9 303 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 B4GALT6Q9UBX8 382 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SUN2Q9UH99 717 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SARDHQ9UL12 918 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PLA2G4CQ9UP65 541 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SLC8A2Q9UPR5 921 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 CRYL1Q9Y2S2 319 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 DHRS7Q9Y394 339 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 PCDHB1Q9Y5F3 818 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 SCN8AQ9UQD0 1980 aa6.75□□□□□ -1.33
MSH5-217ENST00000494458 TNRC18O15417 2968 aaPredicted RBP6.75□□□□□ -1.33
MSH5-217ENST00000494458 REV3LO60673 3130 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 GLYATL1P3A0A0U1RQE8 302 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 A0A0U1RQS6 177 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 WDR91A4D1P6 747 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 SHISA7A6NL88 538 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 C16orf96A6NNT2 1141 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 H3BMM5 538 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 EIF3FO00303 357 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 PRMT5O14744 637 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ITM2AO43736 263 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 OR1I1O60431 355 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NPHS1O60500 1241 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 NDUFS3O75489 264 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 KAT7O95251 611 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PRAMEF1O95521 474 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PRNPP04156 253 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 CCDC166P0CW27 439 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 RALBP11234 206 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 CYP2A6P11509 494 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 ATP5F1P24539 256 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 NFKBIAP25963 317 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PMLP29590 882 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 PPARGP37231 505 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 RECQLP46063 649 aaPredicted RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 SLC1A6P48664 564 aa6.74□□□□□ -1.33
MSH5-217ENST00000494458 KPNA2P52292 529 aaKnown RBP6.74□□□□□ -1.33
MSH5-217ENST00000494458 HK2P52789 917 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms