RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 TM7SF3Q9NS93 570 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SIDT1Q9NXL6 827 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 THAP10Q9P2Z0 257 aaPredicted RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SLC23A1Q9UHI7 598 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 LSM7Q9UK45 103 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 SCML2Q9UQR0 700 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 MYRFQ9Y2G1 1151 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 ATP8B3O60423 1300 aa5.36□□□□□ -1.55
PTCD3-219ENST00000494323 HELZ2Q9BYK8 2649 aaKnown RBP5.36□□□□□ -1.55
PTCD3-219ENST00000494323 HHLA1C9JL84 531 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 FOXN3O00409 490 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 POLR2DO15514 142 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 TSPAN3O60637 253 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MATN4O95460 622 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 AHSGP02765 367 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 PRB1P04280 392 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CD1AP06126 327 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CENPBP07199 599 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 SBK3P0C264 359 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 FAM200BP0CF97 657 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ACADMP11310 421 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CD58P19256 250 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MGAT1P26572 445 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 OXTRP30559 389 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 SLC7A1P30825 629 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ACSL1P33121 698 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MATKP42679 507 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MFAP3P55082 362 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 GOLGA8FQ08AF8 430 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 GOLGA8DPQ0D2H9 430 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 STK4Q13043 487 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CUL4AQ13619 759 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CUL4BQ13620 913 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF234Q14588 700 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 STARD3Q14849 445 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CNGA2Q16280 664 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 KIF19Q2TAC6 998 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 KCNT1Q5JUK3 1230 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 IZUMO3Q5VZ72 239 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 TMEM215Q68D42 235 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ANKS6Q68DC2 871 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF529Q6P280 563 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 SHC4Q6S5L8 630 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 LAYNQ6UX15 382 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 UNC13DQ70J99 1090 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 XYLT1Q86Y38 959 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 GSPT2Q8IYD1 628 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ELOA2Q8IYF1 753 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ZNF366Q8N895 744 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 IQUBQ8NA54 791 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 IL17RDQ8NFM7 739 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CADM4Q8NFZ8 388 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 OR52N2Q8NGI0 321 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 DDI1Q8WTU0 396 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 UCMAQ8WVF2 138 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MAML1Q92585 1016 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 NDRG1Q92597 394 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 PRCCQ92733 491 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 TFAP2CQ92754 450 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 PIWIL1Q96J94 861 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 C8orf49Q96NF6 230 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 HNRNPABQ99729 332 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CRB3Q9BUF7 120 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 NUP58Q9BVL2 599 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 UNKQ9C0B0 810 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CIPCQ9C0C6 399 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 C6orf106Q9H6K1 298 aaPredicted RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 ELOVL2Q9NXB9 296 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 AGO1Q9UL18 857 aaKnown RBP5.35□□□□□ -1.55
PTCD3-219ENST00000494323 MTMR6Q9Y217 621 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 BTBD3Q9Y2F9 522 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 CKAP5Q14008 2032 aa5.35□□□□□ -1.55
PTCD3-219ENST00000494323 TMEM131Q92545 1883 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 EIF4E1BA6NMX2 242 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CAPN14A8MX76 684 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 F5H423 210 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 STX6O43752 255 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PIP5K1CO60331 668 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CER1O95813 267 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PENKP01210 267 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 HLA-DRAP01903 254 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 RPN1P04843 607 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 RALAP11233 206 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 P4HA1P13674 534 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 PRKCHP24723 683 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CORO1AP31146 461 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CHKAP35790 457 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 STT3AP46977 705 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 COPAP53621 1224 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 AP3M2P53677 418 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 CLDN6P56747 220 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 RAP2BP61225 183 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 SNRPFP62306 86 aaKnown RBP5.34□□□□□ -1.55
PTCD3-219ENST00000494323 COG7P83436 770 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 IL9RQ01113 521 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 ENPP2Q13822 863 aa5.34□□□□□ -1.55
PTCD3-219ENST00000494323 TMEM95Q3KNT9 176 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms