RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PPIL6Q8IXY8 311 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF548Q8NEK5 533 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PPHLN1Q8NEY8 458 aaKnown RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 GDAP1Q8TB36 358 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CPT1BQ92523 772 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 PDXPQ96GD0 296 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 VPS35Q96QK1 796 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 RANBP9Q96S59 729 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 VPS18Q9P253 973 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 KLF15Q9UIH9 416 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 FKBPLQ9UIM3 349 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
TRA2A-209ENST00000494255 SLC17A4Q9Y2C5 497 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 TMEM98Q9Y2Y6 226 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 DGKBQ9Y6T7 804 aa12.38□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF292O60281 2723 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 LRP4O75096 1905 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF106Q9H2Y7 1883 aaKnown RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 TCRBV7S3A2A0A539 114 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 MROH6A6NGR9 719 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 AQP9O43315 295 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 PRAMEF1O95521 474 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 IVLP07476 585 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ALPPL2P10696 532 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ITGALP20701 1170 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ELOCQ15369 112 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ATP13A5Q4VNC0 1218 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 CCDC38Q502W7 563 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ANKRD22Q5VYY1 191 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 DBX2Q6ZNG2 339 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 PIP4P1Q86T03 277 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 FSTL5Q8N475 847 aaPredicted RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 MCUQ8NE86 351 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF398Q8TD17 642 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 RHBDD1Q8TEB9 315 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 LRRC61Q9BV99 259 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 TCEAL2Q9H3H9 227 aaPredicted RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 SUDS3Q9H7L9 328 aaPredicted RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 CARS2Q9HA77 564 aaKnown RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 XAB2Q9HCS7 855 aaKnown RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 DLL3Q9NYJ7 618 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 PNMA8BQ9ULN7 279 aaPredicted RBP12.37□□□□□ -0.43
TRA2A-209ENST00000494255 DOLKQ9UPQ8 538 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 CSNK1G3Q9Y6M4 447 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 SLC30A1Q9Y6M5 507 aa12.37□□□□□ -0.43
TRA2A-209ENST00000494255 CCDC78A2IDD5 438 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 DNALI1O14645 258 aaPredicted RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TM4SF5O14894 197 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 SCAMP1O15126 338 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 FFAR2O15552 330 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TTI1O43156 1089 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 SRP72O76094 671 aaKnown RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TMEM63AO94886 807 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ANXA6P08133 673 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 MLNP12872 115 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 GNPDA1P46926 289 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ID4P47928 161 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 POLD2P49005 469 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 PCID2Q5JVF3 399 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 LDLRAP1Q5SW96 308 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TSTD2Q5T7W7 516 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 MARK2Q7KZI7 788 aaKnown RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 KANSL1Q7Z3B3 1105 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ZNF572Q7Z3I7 529 aaPredicted RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 GKN2Q86XP6 184 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 SDR16C5Q8N3Y7 309 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 EID2Q8N6I1 236 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 DEFB124Q8NES8 71 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ULK4Q96C45 1275 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TTC25Q96NG3 672 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 DUSP23Q9BVJ7 150 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
TRA2A-209ENST00000494255 ASB8Q9H765 288 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 TRIM39Q9HCM9 518 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 UCKL1Q9NWZ5 548 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 NLGN3Q9NZ94 848 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 RIMKLBQ9ULI2 386 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 SUFUQ9UMX1 484 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 BTBD3Q9Y2F9 522 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 CABIN1Q9Y6J0 2220 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 DMDP11532 3685 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 USP34Q70CQ2 3546 aa12.36□□□□□ -0.43
TRA2A-209ENST00000494255 DCDC2BA2VCK2 349 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GPR89AB7ZAQ6 455 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 GOLGA8MH3BSY2 632 aa12.35□□□□□ -0.43
TRA2A-209ENST00000494255 CCL22O00626 93 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms