RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CD48P09326 243 aa19.08■□□□□ 0.65
COL27A1-207ENST00000494090 UBE2R2Q712K3 238 aaPredicted RBP19.08■□□□□ 0.65
COL27A1-207ENST00000494090 LENG1Q96BZ8 264 aaPredicted RBP19.08■□□□□ 0.65
COL27A1-207ENST00000494090 NOL11Q9H8H0 719 aaKnown RBP19.08■□□□□ 0.65
COL27A1-207ENST00000494090 A0A1W2PQH9 124 aa19.08■□□□□ 0.65
COL27A1-207ENST00000494090 G3V2T6 193 aa19.08■□□□□ 0.65
COL27A1-207ENST00000494090 PMM2O15305 246 aa19.08■□□□□ 0.65
COL27A1-207ENST00000494090 ERAL1O75616 437 aaKnown RBP19.08■□□□□ 0.65
COL27A1-207ENST00000494090 FAM151BQ6UXP7 276 aa19.08■□□□□ 0.65
COL27A1-207ENST00000494090 GPN3Q9UHW5 284 aaPredicted RBP19.08■□□□□ 0.65
COL27A1-207ENST00000494090 FGBP02675 491 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 TAF10Q12962 218 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 POM121L1PQ3SYA9 428 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 GPR158Q5T848 1215 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 PIGWQ7Z7B1 504 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 TEX47Q8TBZ9 253 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 TIPRLO75663 272 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 PPM1JQ5JR12 505 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 FAM47BQ8NA70 645 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 OR2T34Q8NGX1 318 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 OR2T3Q8NH03 318 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 OSBPL7Q9BZF2 842 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 ARHGEF4Q9NR80 690 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 NR2E1Q9Y466 385 aa19.08■□□□□ 0.64
COL27A1-207ENST00000494090 FOXO6A8MYZ6 492 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 SLC6A2P23975 617 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 GOLGA2P5Q9HBQ8 144 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 NPEPPSL1A6NEC2 478 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 ATG13O75143 517 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 GPR135Q8IZ08 494 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 CLIP3Q96DZ5 547 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 CLPTM1LQ96KA5 538 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 C12orf65Q9H3J6 166 aaKnown RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 DENND2DQ9H6A0 471 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 COL20A1Q9P218 1284 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 COQ4Q9Y3A0 265 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 C2CD4BA6NLJ0 364 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 TULP2O00295 520 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 TSPAN1O60635 241 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 PLIN3O60664 434 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 ZBTB48P10074 688 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 PKMP14618 531 aaKnown RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 ADSLP30566 484 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 UGT1A5P35504 534 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 BNC1Q01954 994 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 SEMA5AQ13591 1074 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 LBX2Q6XYB7 198 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 TFAP2BQ92481 460 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 TLE6Q9H808 572 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 H0Y858 1186 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 SYN3O14994 580 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 MSI1O43347 362 aaKnown RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 SUV39H1O43463 412 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 NDST3O95803 873 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 IFNGP01579 166 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 PRNPP04156 253 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 UNGP13051 313 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 ACTR3P61158 418 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 DUSP4Q13115 394 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 HIPK1Q86Z02 1210 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 CLEC4DQ8WXI8 215 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 DEFB118Q96PH6 123 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 APOBEC3GQ9HC16 384 aaKnown RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 SAMD4AQ9UPU9 718 aaKnown RBP19.07■□□□□ 0.64
COL27A1-207ENST00000494090 PCDHA2Q9Y5H9 948 aa19.07■□□□□ 0.64
COL27A1-207ENST00000494090 GLYATL1P3A0A0U1RQE8 302 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 NEDD8-MDP1E9PL57 170 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 SPIBQ01892 262 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 MBTD1Q05BQ5 628 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 CMTM6Q9NX76 183 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 PTGFRNQ9P2B2 879 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 CAPN8A6NHC0 703 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 DUSP11O75319 330 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 CDH5P33151 784 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 MSX2P35548 267 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 RPTNQ6XPR3 784 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 ZNF567Q8N184 647 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 MAB21L3Q8N8X9 362 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 BANPQ8N9N5 519 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 ADGRE2Q9UHX3 823 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 FADS3Q9Y5Q0 445 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3DA0A087WVF3 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3IA0A087WXS9 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3EA0A087X179 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3KA0A087X1G2 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3FA6NER0 549 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3LB9A6J9 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 SCAMP3O14828 347 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 PER2O15055 1255 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 OR10H3O60404 316 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3HP0C7X1 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 SSR2P43308 183 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 ASMTP46597 345 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 LSM3P62310 102 aaKnown RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 ARL13AQ5H913 290 aaPredicted RBP19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3GQ6DHY5 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 TBC1D3CQ6IPX1 549 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 SLC25A24Q6NUK1 477 aa19.06■□□□□ 0.64
COL27A1-207ENST00000494090 RHBDF2Q6PJF5 856 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms