RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 D6RAR5 112 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 PDE2AO00408 941 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-212ENST00000493940 PJA2O43164 708 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 KALRNO60229 2985 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 TCEA3O75764 348 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 DXOO77932 396 aaKnown RBP12.51□□□□□ -0.41
HSPG2-212ENST00000493940 PYGMP11217 842 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 GLB1P16278 677 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 BPIP17213 487 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 RBL1P28749 1068 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 NR2C2P49116 596 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 SPIDRQ14159 915 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 TFDP2Q14188 446 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 PTPRCAPQ14761 206 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 SPA17Q15506 151 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 ALS2CLQ60I27 953 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 FOXR1Q6PIV2 292 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 CCNJLQ8IV13 435 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 NDUFAF2Q8N183 169 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 SEMA6CQ9H3T2 930 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 ZFYVE1Q9HBF4 777 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 RDH14Q9HBH5 336 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 EVA1BQ9NVM1 165 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 ATXN10Q9UBB4 475 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 SLC23A2Q9UGH3 650 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 PACSIN2Q9UNF0 486 aaPredicted RBP12.51□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF711Q9Y462 761 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
HSPG2-212ENST00000493940 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 HELZ2Q9BYK8 2649 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 BTNL10A8MVZ5 291 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 CDRT15L2A8MXV6 281 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 GPR39O43194 453 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 BUD23O43709 281 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ASMTLO95671 621 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 NDST3O95803 873 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SLC4A1P02730 911 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF8P17098 575 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 NFKBIAP25963 317 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ETV5P41161 510 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 WNT3AP56704 352 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 OTUD4Q01804 1114 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ZFP36L1Q07352 338 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SIRPB2Q5JXA9 342 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 NKAIN2Q5VXU1 208 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 USP53Q70EK8 1073 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 PID1Q7Z2X4 250 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF438Q7Z4V0 828 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF761Q86XN6 746 aaPredicted RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 CCDC50Q8IVM0 306 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SLITRK4Q8IW52 837 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SPACA3Q8IXA5 215 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 TTC30BQ8N4P2 665 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 SPC24Q8NBT2 197 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 P3H4Q92791 437 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 OR2M4Q96R27 311 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ADGRE3Q9BY15 652 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 GSDMCQ9BYG8 508 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 PRORYQ9H606 182 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ZNHIT2Q9UHR6 403 aa12.5□□□□□ -0.41
HSPG2-212ENST00000493940 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 TCRBV7S2A1N4TA0A589 114 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 TK2O00142 265 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 GAPDHSO14556 408 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 NUDT21O43809 227 aaKnown RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 MTX2O75431 263 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 AGTP01019 485 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 PNLIPP16233 465 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ITIH1P19827 911 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 CA4P22748 312 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 CTNNA2P26232 953 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 CD1CP29017 333 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ACTN2P35609 894 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ACTR1BP42025 376 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 VAV2P52735 878 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ACTR1AP61163 376 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 TLE3Q04726 772 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ILF3Q12906 894 aaKnown RBP eCLIP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 MSLNQ13421 630 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 NR1D2Q14995 579 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 PPP2R5EQ16537 467 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ODF2Q5BJF6 829 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 IGF2-ASQ6U949 168 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 CHST15Q7LFX5 561 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ADGRG6Q86SQ4 1221 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 RAVER1Q8IY67 606 aaKnown RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 HTR3CQ8WXA8 447 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 FCRL5Q96RD9 977 aa12.49□□□□□ -0.41
HSPG2-212ENST00000493940 UBL7Q96S82 380 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 BAG1Q99933 345 aaPredicted RBP12.49□□□□□ -0.41
HSPG2-212ENST00000493940 NUDT22Q9BRQ3 303 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms