RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 CD1CP29017 333 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 SLC1A1P43005 524 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 CNGA4Q8IV77 575 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 RHOT1Q8IXI2 618 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 TTC9Q92623 222 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 USP7Q93009 1102 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 CCDC74BQ96LY2 380 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 OLFM3Q96PB7 478 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 WDR24Q96S15 920 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 DDX56Q9NY93 547 aaKnown RBP23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 SEPT10Q9P0V9 454 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 ZNHIT2Q9UHR6 403 aa23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 OAS3Q9Y6K5 1087 aaKnown RBP23.49■■□□□ 1.35
RHBDD3-206ENST00000493894 ATMQ13315 3056 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 IGHV1OR21-1A0A087WYE8 117 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 IGHV5-10-1A0A0J9YXX1 117 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 FADS2P1A8MWK0 482 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 DNAJC6O75061 913 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 FASLGP48023 281 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 TRA2AQ13595 282 aaKnown RBP eCLIP23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 TGIF1Q15583 401 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 TMEM164Q5U3C3 297 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 NPNTQ6UXI9 565 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 CHST15Q7LFX5 561 aaPredicted RBP23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 LYSMD3Q7Z3D4 306 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 ZNF843Q8N446 348 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 SFRP1Q8N474 314 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 RNF214Q8ND24 703 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 RCBTB1Q8NDN9 531 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 OR4D9Q8NGE8 314 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 SLC37A2Q8TED4 501 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 RNF25Q96BH1 459 aaPredicted RBP23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 IMP4Q96G21 291 aaKnown RBP23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 AGAP3Q96P47 875 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 DPYSL5Q9BPU6 564 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 BRD8Q9H0E9 1235 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 RMI1Q9H9A7 625 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 FOXJ2Q9P0K8 574 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 PRKAB1Q9Y478 270 aa23.48■■□□□ 1.35
RHBDD3-206ENST00000493894 ZFC3H1O60293 1989 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 CD82P27701 267 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 DYNLT1P63172 113 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 GPLD1P80108 840 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 KIAA1614Q5VZ46 1190 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 ZNF574Q6ZN55 896 aaPredicted RBP23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 NT5DC3Q86UY8 548 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 B3GNT4Q9C0J1 378 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 STN1Q9H668 368 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 ZFYVE1Q9HBF4 777 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 INTUQ9ULD6 942 aa23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 CNOT6Q9ULM6 557 aaKnown RBP23.47■■□□□ 1.35
RHBDD3-206ENST00000493894 C9orf172C9J069 976 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 SPOPO43791 374 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 SLC4A1P02730 911 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 ACP5P13686 325 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 TNNT1P13805 278 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 CSF2RBP32927 897 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 PPM1FP49593 454 aaPredicted RBP23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 LIMK2P53671 638 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 PCSK7Q16549 785 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 ZNF569Q5MCW4 686 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 NKAIN2Q5VXU1 208 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 CCDC112Q8NEF3 446 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 AHCYL2Q96HN2 611 aaKnown RBP23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 TRIB3Q96RU7 358 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 SLC38A3Q99624 504 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 SLC25A51Q9H1U9 297 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 RAD18Q9NS91 495 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 PCDHB11Q9Y5F2 797 aa23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 PCYT1BQ9Y5K3 369 aaPredicted RBP23.46■■□□□ 1.35
RHBDD3-206ENST00000493894 AKR1B15C9JRZ8 316 aaPredicted RBP23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 THRAP10827 490 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 CCL4P13236 92 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 SLC2A4P14672 509 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 DCDC1P59894 354 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 HHEXQ03014 270 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 SQSTM1Q13501 440 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 SLC14A2Q15849 920 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 ALS2CLQ60I27 953 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 KDELC2Q7Z4H8 507 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 ZFAND4Q86XD8 727 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 OR10G6Q8NH81 332 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 ZSCAN5AQ9BUG6 496 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 SPATA16Q9BXB7 569 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 CARD9Q9H257 536 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 KCNK6Q9Y257 313 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 ZNF711Q9Y462 761 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 HYOU1Q9Y4L1 999 aa23.45■■□□□ 1.34
RHBDD3-206ENST00000493894 AHCTF1Q8WYP5 2266 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 TRBV23OR9-2A0A075B6M9 112 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 DUX1O43812 170 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 EML2O95834 649 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 PIRTP0C851 137 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 COMTP21964 271 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 CSTF2P33240 577 aaKnown RBP eCLIP23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 CDK18Q07002 472 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 LY6DQ14210 128 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 TCEAL1Q15170 157 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 MANEAQ5SRI9 462 aa23.44■■□□□ 1.34
RHBDD3-206ENST00000493894 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms