RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FUT8Q9BYC5 575 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 ZNF446Q9NWS9 450 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 NFKBIL1Q9UBC1 381 aaPredicted RBP19.25■□□□□ 0.67
USP39-218ENST00000493829 PLXNB3Q9ULL4 1909 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 CACNA1IQ9P0X4 2223 aa19.25■□□□□ 0.67
USP39-218ENST00000493829 SOD1P00441 154 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 NUDT17P0C025 328 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 PMLP29590 882 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CREB5Q02930 508 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 MARK2Q7KZI7 788 aaKnown RBP19.24■□□□□ 0.67
USP39-218ENST00000493829 ZNF765Q7L2R6 523 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 HDXQ7Z353 690 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 STRA8Q7Z7C7 330 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 TRIM74Q86UV6 250 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 SERPINA9Q86WD7 417 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CILP2Q8IUL8 1156 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CALML6Q8TD86 181 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.24■□□□□ 0.67
USP39-218ENST00000493829 LENG8Q96PV6 779 aaPredicted RBP19.24■□□□□ 0.67
USP39-218ENST00000493829 C1QTNF7Q9BXJ2 289 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CTNNAL1Q9UBT7 734 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 FBXO5Q9UKT4 447 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 PLXND1Q9Y4D7 1925 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 MTX2O75431 263 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 IGFALSP35858 605 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 PTPN5P54829 565 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CLDN2P57739 230 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 ITGA9Q13797 1035 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 STAT4Q14765 748 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 DBN1Q16643 649 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 ZNF789Q5FWF6 425 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 ZNF648Q5T619 568 aaPredicted RBP19.24■□□□□ 0.67
USP39-218ENST00000493829 ARMCX6Q7L4S7 300 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 LRRC6Q86X45 466 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CNTN4Q8IWV2 1026 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 C19orf43Q9BQ61 176 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CCDC77Q9BR77 488 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 CDH19Q9H159 772 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 EBF2Q9HAK2 575 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 VPS18Q9P253 973 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 TXNDC16Q9P2K2 825 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 TMPRSS11EQ9UL52 423 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 OR1A2Q9Y585 309 aa19.24■□□□□ 0.67
USP39-218ENST00000493829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 TLDC2A0PJX2 215 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 GPR37L1O60883 481 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 GCAP28676 217 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 SDCCAG8Q86SQ7 713 aaPredicted RBP19.23■□□□□ 0.67
USP39-218ENST00000493829 WDR5BQ86VZ2 330 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 LONP2Q86WA8 852 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 TMEFF1Q8IYR6 380 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 NXPE1Q8N323 547 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 C2CD4AQ8NCU7 369 aaPredicted RBP19.23■□□□□ 0.67
USP39-218ENST00000493829 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.23■□□□□ 0.67
USP39-218ENST00000493829 IKBKGQ9Y6K9 419 aa19.23■□□□□ 0.67
USP39-218ENST00000493829 UBA6A0AVT1 1052 aaPredicted RBP19.22■□□□□ 0.67
USP39-218ENST00000493829 MEI4A8MW99 385 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 H0Y8X5 98 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 LATO43561 262 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 OR1I1O60431 355 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 NDUFS3O75489 264 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 INHBAP08476 426 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 OGNP20774 298 aaKnown RBP19.22■□□□□ 0.67
USP39-218ENST00000493829 ACRV1P26436 265 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 HOXA6P31267 233 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 AKT1P31749 480 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 MSH2P43246 934 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 DPTQ07507 201 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 ZNF844Q08AG5 666 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 INPP5AQ14642 412 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 AARS2Q5JTZ9 985 aaKnown RBP19.22■□□□□ 0.67
USP39-218ENST00000493829 GPRC6AQ5T6X5 926 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 PNCKQ6P2M8 343 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 PACS1Q6VY07 963 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 CYS1Q717R9 158 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 HEATR4Q86WZ0 1026 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 GPR150Q8NGU9 434 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 GABPB2Q8TAK5 448 aaPredicted RBP19.22■□□□□ 0.67
USP39-218ENST00000493829 CENPTQ96BT3 561 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 HSPA12BQ96MM6 686 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 RUFY1Q96T51 708 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 KLF6Q99612 283 aaPredicted RBP19.22■□□□□ 0.67
USP39-218ENST00000493829 BOCQ9BWV1 1114 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 TBK1Q9UHD2 729 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 CRYL1Q9Y2S2 319 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 NFS1Q9Y697 457 aa19.22■□□□□ 0.67
USP39-218ENST00000493829 SASH3O75995 380 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 IVLP07476 585 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 HNRNPA2B1P22626 353 aaKnown RBP19.21■□□□□ 0.67
USP39-218ENST00000493829 GABRB3P28472 473 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 CCR5P51681 352 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 BMPR2Q13873 1038 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 AGERQ15109 404 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 TYSND1Q2T9J0 566 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 GPR33Q49SQ1 333 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 CEP85LQ5SZL2 805 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 ZNF449Q6P9G9 518 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 CNSTQ6PJW8 725 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 DOK6Q6PKX4 331 aa19.21■□□□□ 0.67
USP39-218ENST00000493829 RAVER1Q8IY67 606 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms