RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 RIPK3Q9Y572 518 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 NFS1Q9Y697 457 aa3.28□□□□□ -1.88
PTCD3-218ENST00000493430 ROBO3Q96MS0 1386 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 SZT2Q5T011 3432 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 A0A096LPK6 155 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 DYTNA2CJ06 578 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 TULP2O00295 520 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CXCL11O14625 94 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 FFAR2O15552 330 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 FLOT1O75955 427 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 NDUFB10O96000 172 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 LDHCP07864 332 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 LYL1P12980 280 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CHN1P15882 459 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 AMD1P17707 334 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 ICA1Q05084 483 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 LRRC26Q2I0M4 334 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 XKR9Q5GH70 373 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 STPG1Q5TH74 334 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 ANKRD45Q5TZF3 282 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 C12orf60Q5U649 245 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 TATDN1Q6P1N9 297 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC174Q6PII3 467 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 RHBDF2Q6PJF5 856 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 NOL8Q76FK4 1167 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 SLC44A2Q8IWA5 706 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 BRSK2Q8IWQ3 736 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CPXCR1Q8N123 301 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 GALNT15Q8N3T1 639 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 PTGR2Q8N8N7 351 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 MSTO1Q9BUK6 570 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 DDX23Q9BUQ8 820 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 KATNAL1Q9BW62 490 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 MOV10L1Q9BXT6 1211 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CRNKL1Q9BZJ0 848 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 NPFFR1Q9GZQ6 430 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CLPBQ9H078 707 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 ACAD9Q9H845 621 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 RAVER2Q9HCJ3 691 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 OBP2BQ9NPH6 170 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 CHST12Q9NRB3 414 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 TMLHEQ9NVH6 421 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 GRHL1Q9NZI5 618 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 UPB1Q9UBR1 384 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 HERC5Q9UII4 1024 aaKnown RBP3.27□□□□□ -1.89
PTCD3-218ENST00000493430 RCE1Q9Y256 329 aa3.27□□□□□ -1.89
PTCD3-218ENST00000493430 MYO10Q9HD67 2058 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 UMODL1Q5DID0 1318 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CITO14578 2027 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 TARSL2A2RTX5 802 aaKnown RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PRAC2D3DTV9 90 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 RNF113AO15541 343 aaKnown RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 STRNO43815 780 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ACTL6BO94805 426 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 BAG3O95817 575 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CH25HO95992 272 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PGK1P00558 417 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ASNSP08243 561 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 GOLGA8HP0CJ92 632 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 MX1P20591 662 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 SERPINA4P29622 427 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 AVPR2P30518 371 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PPM1AP35813 382 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 RPL3P39023 403 aaKnown RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 TDO2P48775 406 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CXCR3P49682 368 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 AP2B1P63010 937 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 BEX3Q00994 111 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CNTN2Q02246 1040 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CYP4A11Q02928 519 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ARL16Q0P5N6 197 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ST3GAL1Q11201 340 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 HDAC1Q13547 482 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 TTC22Q5TAA0 569 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PMS2CLQ68D20 193 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 DGAT2L7PQ6IED9 249 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ADAM5Q6NVV9 412 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 C9orf139Q6ZV77 190 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CHST3Q7LGC8 479 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 SRLQ86TD4 932 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ERC1Q8IUD2 1116 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC117Q8IWD4 279 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 RPAP2Q8IXW5 612 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PGBD5Q8N414 524 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 KBTBD3Q8NAB2 608 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 NEK9Q8TD19 979 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 GPT2Q8TD30 523 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PIBF1Q8WXW3 757 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 USP6NLQ92738 828 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CD101Q93033 1021 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 RILPL2Q969X0 211 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 C3orf49Q96BT1 292 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 DCTPP1Q9H773 170 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 CLK4Q9HAZ1 481 aaKnown RBP3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ARFGAP3Q9NP61 516 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 PRDM8Q9NQV8 689 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ECHDC1Q9NTX5 307 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 TMEM51Q9NW97 253 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 MORF4L1Q9UBU8 362 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 FBXO40Q9UH90 709 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms