RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 BNC1Q01954 994 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ILF3Q12906 894 aaKnown RBP eCLIP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 CALCOCO2Q13137 446 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 OLIG2Q13516 323 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 FZD2Q14332 565 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 WHAMMP3Q1A5X7 153 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ZRANB3Q5FWF4 1079 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 LDLRAP1Q5SW96 308 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 HENMT1Q5T8I9 393 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 KCTD11Q693B1 232 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 TTC27Q6P3X3 843 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 TAS2R42Q7RTR8 314 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 TAF8Q7Z7C8 310 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PRUNE1Q86TP1 453 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 SPATS2Q86XZ4 545 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GATAD2AQ86YP4 633 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PPIL6Q8IXY8 311 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 CBARPQ8N350 705 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 SDR16C5Q8N3Y7 309 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 OTUD6BQ8N6M0 293 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 BBOF1Q8ND07 529 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR26Q8NDV2 337 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GABPB2Q8TAK5 448 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 STYXQ8WUJ0 223 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 TSACCQ96A04 125 aaPredicted RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 KRT12Q99456 494 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GORASP1Q9BQQ3 440 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 TEX101Q9BY14 249 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 GSDMCQ9BYG8 508 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 IL22Q9GZX6 179 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ASB8Q9H765 288 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 IL21RQ9HBE5 538 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 XAB2Q9HCS7 855 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 RXFP3Q9NSD7 469 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PIH1D1Q9NWS0 290 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 NCKIPSDQ9NZQ3 722 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 IL17CQ9P0M4 197 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 PCYOX1Q9UHG3 505 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNHIT2Q9UHR6 403 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 UTP11Q9Y3A2 253 aaKnown RBP8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 CEP250Q9BV73 2442 aa8.08□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF106Q9H2Y7 1883 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR89AB7ZAQ6 455 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 K7ESM1 405 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SMAPO00193 183 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 AURKAO14965 403 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 FFAR2O15552 330 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 ZW10O43264 779 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SH3BP5O60239 455 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 PIAS2O75928 621 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CDK14O94921 469 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 PRAMEF1O95521 474 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 LDOC1O95751 146 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 GPR89BP0CG08 455 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CSRP1P21291 193 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 DGKAP23743 735 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 MC4RP32245 332 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 BNIP3Q12983 259 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 PTK6Q13882 451 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CDKN3Q16667 212 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 FASTKD1Q53R41 847 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 DNAJC21Q5F1R6 531 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 PCID2Q5JVF3 399 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 IZUMO3Q5VZ72 239 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 LRRC8BQ6P9F7 803 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF449Q6P9G9 518 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 MARK2Q7KZI7 788 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 DGLUCYQ7Z3D6 616 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 TTC30BQ8N4P2 665 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 EID2Q8N6I1 236 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 GLIS1Q8NBF1 620 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF548Q8NEK5 533 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SPATA4Q8NEY3 305 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 OR6P1Q8NGX9 317 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 ZNF398Q8TD17 642 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SAP25Q8TEE9 199 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 HEXDCQ8WVB3 486 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 GLYATL1Q969I3 302 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CNDP2Q96KP4 475 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 TBATAQ96M53 351 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 C19orf43Q9BQ61 176 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 FRMD8Q9BZ67 464 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 RAB17Q9H0T7 212 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 OR2AG1Q9H205 316 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 STN1Q9H668 368 aaKnown RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 RMI1Q9H9A7 625 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CASS4Q9NQ75 786 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 NLGN3Q9NZ94 848 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 VPS18Q9P253 973 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 NFKBIL1Q9UBC1 381 aaPredicted RBP8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 FKBPLQ9UIM3 349 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CDC23Q9UJX2 597 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 SUFUQ9UMX1 484 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 TMEM98Q9Y2Y6 226 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 CSNK1G3Q9Y6M4 447 aa8.07□□□□□ -1.12
TM4SF1-204ENST00000493348 DGKBQ9Y6T7 804 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms