RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LRRC66Q68CR7 880 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 DENND2CQ68D51 928 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 BORAQ6PGQ7 559 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ARHGAP22Q7Z5H3 698 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 GALNT13Q8IUC8 556 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MAP7D3Q8IWC1 876 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 HSPH1Q92598 858 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 EXTL1Q92935 676 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 AHCYL2Q96HN2 611 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 CALR3Q96L12 384 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ZNF670Q9BS34 389 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 HERPUD2Q9BSE4 406 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 FUCA2Q9BTY2 467 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 TDRD1Q9BXT4 1180 aaKnown RBP9.07□□□□□ -0.96
HDAC3-212ENST00000492407 SPRY4Q9C004 299 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 SLC25A18Q9H1K4 315 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 UCK1Q9HA47 277 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 FBXO8Q9NRD0 319 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 RAD18Q9NS91 495 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 SLC39A1Q9NY26 324 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 MYO1AQ9UBC5 1043 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 ST14Q9Y5Y6 855 aa9.07□□□□□ -0.96
HDAC3-212ENST00000492407 PIEZO2Q9H5I5 2752 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 KIR2DS5A0A0G2JLQ3 304 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 A0A0G2JNG1 304 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 ZNF891A8MT65 544 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 KIR2DS3K7RE56 304 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 DYNC1I1O14576 645 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 TOX3O15405 576 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 DNAJC6O75061 913 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 SERPING1P05155 500 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 TPM3P06753 285 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 CASQ1P31415 396 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 UGT1A3P35503 534 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 POLD2P49005 469 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 ARSEP51690 589 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 EPHB1P54762 984 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 MAXP61244 160 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 MC1RQ01726 317 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 MAP7Q14244 749 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 KRT81Q14533 505 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 KIR2DS5Q14953 304 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 E4F1Q66K89 784 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 HGSNATQ68CP4 663 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 IYDQ6PHW0 289 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 CEACAM20Q6UY09 585 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 PRICKLE2Q7Z3G6 844 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 SLC9B2Q86UD5 537 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 TSPAN33Q86UF1 283 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 VSIG1Q86XK7 387 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 IL22RA1Q8N6P7 574 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 BMPERQ8N8U9 685 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 CCHCR1Q8TD31 782 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 KIAA1143Q96AT1 154 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 SLC45A3Q96JT2 553 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 SRPK1Q96SB4 655 aaKnown RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 SLC38A3Q99624 504 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 XPO4Q9C0E2 1151 aaKnown RBP9.06□□□□□ -0.96
HDAC3-212ENST00000492407 NT5MQ9NPB1 228 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 RBM22Q9NW64 420 aaKnown RBP eCLIP9.06□□□□□ -0.961e-7■■■■■ 41.1
HDAC3-212ENST00000492407 PILRAQ9UKJ1 303 aa9.06□□□□□ -0.96
HDAC3-212ENST00000492407 ANKRD33BA6NCL7 494 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ZNF487B1APH4 448 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ARHGAP6O43182 974 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 SERPINC1P01008 464 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PRLP01236 227 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 KRT7P08729 469 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ANKRD34CP0C6C1 535 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 FAM87AP0C7U9 286 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 SKILP12757 684 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 TCF4P15884 667 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 CTPS1P17812 591 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PAX7P23759 505 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 CCR10P46092 362 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ARSDP51689 593 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 TPM4P67936 248 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ZBED6P86452 979 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 HHEXQ03014 270 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ITKQ08881 620 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ABHD18Q0P651 414 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ANKRD20A8PQ5CZ79 823 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 HENMT1Q5T8I9 393 aaKnown RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PDPK2PQ6A1A2 396 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 VASH2Q86V25 355 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 CACNA2D3Q8IZS8 1091 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 NLGN4XQ8N0W4 816 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 RCBTB1Q8NDN9 531 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 NLGN4YQ8NFZ3 816 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ARRDC2Q8TBH0 407 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 SLC37A2Q8TED4 501 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PTCD2Q8WV60 388 aaKnown RBP9.05□□□□□ -0.96
HDAC3-212ENST00000492407 PATE1Q8WXA2 126 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 HTR3CQ8WXA8 447 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 ART4Q93070 314 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 SCAMP4Q969E2 229 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 FAF2Q96CS3 445 aa9.05□□□□□ -0.96
HDAC3-212ENST00000492407 RIOK2Q9BVS4 552 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms