RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 B4GALT6Q9UBX8 382 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 AAR2Q9Y312 384 aaKnown RBP11□□□□□ -0.65
TMEM39A-211ENST00000491685 UNC13CQ8NB66 2214 aa11□□□□□ -0.65
TMEM39A-211ENST00000491685 CCDC187A0A096LP49 1063 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 B4DGG1 531 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 D6RAR5 112 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 ERVH48-1M5A8F1 160 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 PGRMC1O00264 195 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 NOBOXO60393 691 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 ANXA9O76027 345 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 TNFSF15O95150 251 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 RPLP0P05388 317 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 LHCGRP22888 699 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 KELP23276 732 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 RBL1P28749 1068 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 MAXP61244 160 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 TRAF2Q12933 501 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 SRSF6Q13247 344 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CLN3Q13286 438 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 KLF1Q13351 362 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 PRKD1Q15139 912 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CNGA3Q16281 694 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 ARMC12Q5T9G4 340 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 DRICH1Q6PGQ1 229 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 SYT10Q6XYQ8 523 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 TMPRSS9Q7Z410 1059 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CLEC14AQ86T13 490 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CCDC89Q8N998 374 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 GPR156Q8NFN8 814 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 OR6C4Q8NGE1 309 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 OR56A4Q8NGH8 313 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 WDR36Q8NI36 951 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CCDC97Q96F63 343 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 WBP1Q96G27 269 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 COQ10AQ96MF6 247 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 RUNDC3BQ96NL0 473 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 QKIQ96PU8 341 aaKnown RBP eCLIP10.99□□□□□ -0.659e-7■■■■□ 26.6
TMEM39A-211ENST00000491685 SRPK1Q96SB4 655 aaKnown RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 MGME1Q9BQP7 344 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 ADGRE3Q9BY15 652 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 CLMPQ9H6B4 373 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 SUDS3Q9H7L9 328 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 EPB41L5Q9HCM4 733 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 PHTF1Q9UMS5 762 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 PCDHGC4Q9Y5F7 938 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 PCDHGA8Q9Y5G5 932 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 DGKBQ9Y6T7 804 aa10.99□□□□□ -0.65
TMEM39A-211ENST00000491685 C5orf60A6NFR6 353 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 TMX2-CTNND1H3BSU7 103 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PDE2AO00408 941 aaPredicted RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ZW10O43264 779 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 LIASO43766 372 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 SOCS5O75159 536 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 TNFP01375 233 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 FUCA1P04066 466 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PTPN3P26045 913 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 RBMS1P29558 406 aaKnown RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 EPHB1P54762 984 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 SNX1Q13596 522 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PEX6Q13608 980 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 IHHQ14623 411 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ACOX1Q15067 660 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PARP6Q2NL67 630 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ANKRD20A2Q5SQ80 823 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ANKRD20A1Q5TYW2 823 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ANKRD20A3Q5VUR7 823 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 KIAA1614Q5VZ46 1190 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 DENND2CQ68D51 928 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 LVRNQ6Q4G3 990 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 RFLNAQ6ZTI6 216 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 HSD11B1LQ7Z5J1 315 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 TSPAN33Q86UF1 283 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 GKN2Q86XP6 184 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 Q8N9G6 341 aaPredicted RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 SLC35B2Q8TB61 432 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 GRK7Q8WTQ7 553 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PDCD6IPQ8WUM4 868 aaKnown RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 C1orf54Q8WWF1 131 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ZNF592Q92610 1267 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 TTC9Q92623 222 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 MAGOHBQ96A72 148 aaKnown RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 LIN37Q96GY3 246 aaPredicted RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 FCRL5Q96RD9 977 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 GFM1Q96RP9 751 aaKnown RBP10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 WDR24Q96S15 920 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 SLC25A51Q9H1U9 297 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 LRRN3Q9H3W5 708 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 NOD2Q9HC29 1040 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 GLOD4Q9HC38 313 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 RSPH14Q9UHP6 348 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 ST14Q9Y5Y6 855 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 RNF215Q9Y6U7 377 aa10.98□□□□□ -0.65
TMEM39A-211ENST00000491685 PRSS38A1L453 326 aa10.97□□□□□ -0.65
TMEM39A-211ENST00000491685 NPIPB15A6NHN6 443 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-211ENST00000491685 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
TMEM39A-211ENST00000491685 HTRA2O43464 458 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms