RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 LINC00303Q3SY05 128 aa8.22□□□□□ -1.09
APP-216ENST00000491395 MANEAQ5SRI9 462 aa8.22□□□□□ -1.09
APP-216ENST00000491395 ZNF648Q5T619 568 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 NPNTQ6UXI9 565 aa8.22□□□□□ -1.09
APP-216ENST00000491395 B4GALNT4Q76KP1 1039 aa8.22□□□□□ -1.09
APP-216ENST00000491395 CHST15Q7LFX5 561 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 KDELC2Q7Z4H8 507 aa8.22□□□□□ -1.09
APP-216ENST00000491395 DTX1Q86Y01 620 aa8.22□□□□□ -1.09
APP-216ENST00000491395 SFRP1Q8N474 314 aa8.22□□□□□ -1.09
APP-216ENST00000491395 EXD3Q8N9H8 876 aa8.22□□□□□ -1.09
APP-216ENST00000491395 OR4D9Q8NGE8 314 aa8.22□□□□□ -1.09
APP-216ENST00000491395 SLC37A2Q8TED4 501 aa8.22□□□□□ -1.09
APP-216ENST00000491395 RNF25Q96BH1 459 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 EID2BQ96D98 161 aa8.22□□□□□ -1.09
APP-216ENST00000491395 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
APP-216ENST00000491395 MED8Q96G25 268 aa8.22□□□□□ -1.09
APP-216ENST00000491395 ZNF830Q96NB3 372 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 LYSMD1Q96S90 227 aa8.22□□□□□ -1.09
APP-216ENST00000491395 DNAJC7Q99615 494 aa8.22□□□□□ -1.09
APP-216ENST00000491395 MLPHQ9BV36 600 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 BRD8Q9H0E9 1235 aa8.22□□□□□ -1.09
APP-216ENST00000491395 DEF6Q9H4E7 631 aa8.22□□□□□ -1.09
APP-216ENST00000491395 ARFGAP3Q9NP61 516 aa8.22□□□□□ -1.09
APP-216ENST00000491395 AKAP7Q9P0M2 348 aaPredicted RBP8.22□□□□□ -1.09
APP-216ENST00000491395 SEPT10Q9P0V9 454 aa8.22□□□□□ -1.09
APP-216ENST00000491395 DNPEPQ9ULA0 475 aa8.22□□□□□ -1.09
APP-216ENST00000491395 RPL26L1Q9UNX3 145 aaKnown RBP8.22□□□□□ -1.09
APP-216ENST00000491395 KCNK6Q9Y257 313 aa8.22□□□□□ -1.09
APP-216ENST00000491395 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
APP-216ENST00000491395 SSU72P8A0A1W2PR75 194 aa8.21□□□□□ -1.1
APP-216ENST00000491395 RGSL1A5PLK6 1076 aa8.21□□□□□ -1.1
APP-216ENST00000491395 A8MU76 341 aa8.21□□□□□ -1.1
APP-216ENST00000491395 B8ZZF3 427 aa8.21□□□□□ -1.1
APP-216ENST00000491395 APOL1O14791 398 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SNX2O60749 519 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TPM3P06753 285 aa8.21□□□□□ -1.1
APP-216ENST00000491395 ACP5P13686 325 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TNNT1P13805 278 aa8.21□□□□□ -1.1
APP-216ENST00000491395 CSTF2P33240 577 aaKnown RBP eCLIP8.21□□□□□ -1.1
APP-216ENST00000491395 PPM1FP49593 454 aaPredicted RBP8.21□□□□□ -1.1
APP-216ENST00000491395 ARSDP51689 593 aa8.21□□□□□ -1.1
APP-216ENST00000491395 CYP4F2P78329 520 aa8.21□□□□□ -1.1
APP-216ENST00000491395 PPIDQ08752 370 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 AP1B1Q10567 949 aa8.21□□□□□ -1.1
APP-216ENST00000491395 NFATC2Q13469 925 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TRA2AQ13595 282 aaKnown RBP eCLIP8.21□□□□□ -1.13e-10■■■■□ 21.8
APP-216ENST00000491395 PDK1Q15118 436 aa8.21□□□□□ -1.1
APP-216ENST00000491395 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.21□□□□□ -1.1
APP-216ENST00000491395 HENMT1Q5T8I9 393 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 TMEM164Q5U3C3 297 aa8.21□□□□□ -1.1
APP-216ENST00000491395 ALS2CLQ60I27 953 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SLC9A4Q6AI14 798 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TMEM71Q6P5X7 295 aa8.21□□□□□ -1.1
APP-216ENST00000491395 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.1
APP-216ENST00000491395 VSTM4Q8IW00 320 aa8.21□□□□□ -1.1
APP-216ENST00000491395 RAVER1Q8IY67 606 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 AGBL5Q8NDL9 886 aa8.21□□□□□ -1.1
APP-216ENST00000491395 CCHCR1Q8TD31 782 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.21□□□□□ -1.1
APP-216ENST00000491395 EXTL1Q92935 676 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SGF29Q96ES7 293 aa8.21□□□□□ -1.1
APP-216ENST00000491395 IMP4Q96G21 291 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 AGAP3Q96P47 875 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TAAR9Q96RI9 348 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TRIB3Q96RU7 358 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SLC38A3Q99624 504 aa8.21□□□□□ -1.1
APP-216ENST00000491395 MAK16Q9BXY0 300 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 ADGRE3Q9BY15 652 aa8.21□□□□□ -1.1
APP-216ENST00000491395 B3GNT4Q9C0J1 378 aa8.21□□□□□ -1.1
APP-216ENST00000491395 OR2AG1Q9H205 316 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SPTLC3Q9NUV7 552 aa8.21□□□□□ -1.1
APP-216ENST00000491395 HAUS2Q9NVX0 235 aa8.21□□□□□ -1.1
APP-216ENST00000491395 ZNHIT6Q9NWK9 470 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 OCIAD1Q9NX40 245 aa8.21□□□□□ -1.1
APP-216ENST00000491395 PKD2L2Q9NZM6 624 aa8.21□□□□□ -1.1
APP-216ENST00000491395 VPS18Q9P253 973 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TBC1D29Q9UFV1 150 aa8.21□□□□□ -1.1
APP-216ENST00000491395 LCMT1Q9UIC8 334 aa8.21□□□□□ -1.1
APP-216ENST00000491395 SHOC2Q9UQ13 582 aa8.21□□□□□ -1.1
APP-216ENST00000491395 HYOU1Q9Y4L1 999 aa8.21□□□□□ -1.1
APP-216ENST00000491395 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
APP-216ENST00000491395 PCDHGA3Q9Y5H0 932 aa8.21□□□□□ -1.1
APP-216ENST00000491395 LRP4O75096 1905 aa8.21□□□□□ -1.1
APP-216ENST00000491395 TLN1Q9Y490 2541 aaKnown RBP8.21□□□□□ -1.1
APP-216ENST00000491395 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
APP-216ENST00000491395 A6NCN8 305 aa8.2□□□□□ -1.1
APP-216ENST00000491395 EFCAB7A8K855 629 aa8.2□□□□□ -1.1
APP-216ENST00000491395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.2□□□□□ -1.1
APP-216ENST00000491395 PYCARD-AS1I3L0S3 204 aa8.2□□□□□ -1.1
APP-216ENST00000491395 J3QKU1 62 aa8.2□□□□□ -1.1
APP-216ENST00000491395 GRID2O43424 1007 aa8.2□□□□□ -1.1
APP-216ENST00000491395 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
APP-216ENST00000491395 NUAK1O60285 661 aa8.2□□□□□ -1.1
APP-216ENST00000491395 MFAP3LO75121 409 aa8.2□□□□□ -1.1
APP-216ENST00000491395 MTA2O94776 668 aa8.2□□□□□ -1.1
APP-216ENST00000491395 SLC4A1P02730 911 aa8.2□□□□□ -1.1
APP-216ENST00000491395 KRT1P04264 644 aa8.2□□□□□ -1.1
APP-216ENST00000491395 THRAP10827 490 aa8.2□□□□□ -1.1
APP-216ENST00000491395 ZNF8P17098 575 aaPredicted RBP8.2□□□□□ -1.1
APP-216ENST00000491395 CD82P27701 267 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms