RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 MMP2P08253 660 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 SETSIPP0DME0 302 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 EDN2P20800 178 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 RRM1P23921 792 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 EFNA5P52803 228 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 HNRNPH2P55795 449 aaKnown RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 EEF1A1P68104 462 aaKnown RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 BLMHQ13867 455 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 CTXN3Q4LDR2 81 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 EEF1A1P5Q5VTE0 462 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 BSPRYQ5W0U4 402 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 C17orf99Q6UX52 265 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 FAM160B2Q86V87 743 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 CEP70Q8NHQ1 597 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 WDR20Q8TBZ3 569 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 ZNF689Q96CS4 500 aaPredicted RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 CLSTN3Q9BQT9 956 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 TWSG1Q9GZX9 223 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 TFB2MQ9H5Q4 396 aaKnown RBP3.73□□□□□ -1.81
PHC3-213ENST00000491258 SAYSD1Q9NPB0 183 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 GRHPRQ9UBQ7 328 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 DLGAP4Q9Y2H0 992 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 GDAQ9Y2T3 454 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 STON1Q9Y6Q2 735 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 ADGRB3O60242 1522 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 ANKRD30BQ9BXX2 1392 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 C1orf167Q5SNV9 1468 aa3.73□□□□□ -1.81
PHC3-213ENST00000491258 ADGRL3Q9HAR2 1447 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 IPO5O00410 1097 aaKnown RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 PEX12O00623 359 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 MMP14P50281 582 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 FOXO1Q12778 655 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 ZNF239Q16600 458 aaKnown RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 WDR38Q5JTN6 314 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 FAM171BQ6P995 826 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 GPAT4Q86UL3 456 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 AFG1LQ8WV93 481 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 THAP4Q8WY91 577 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 SCRN2Q96FV2 425 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 LTV1Q96GA3 475 aaPredicted RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 LINC00479Q96M42 142 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 CDK19Q9BWU1 502 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 MROH8Q9H579 483 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 STN1Q9H668 368 aaKnown RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 MKKSQ9NPJ1 570 aaPredicted RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 BABAM1Q9NWV8 329 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 LOXL2Q9Y4K0 774 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 LRPPRCP42704 1394 aaKnown RBP3.72□□□□□ -1.81
PHC3-213ENST00000491258 PNPLA6Q8IY17 1366 aa3.72□□□□□ -1.81
PHC3-213ENST00000491258 NPHP3Q7Z494 1330 aa3.71□□□□□ -1.81
PHC3-213ENST00000491258 IGLV5-45A0A087WSX0 123 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 A0A0J9YWU9 116 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 CIDEAO60543 219 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 ZNF821O75541 412 aaPredicted RBP3.71□□□□□ -1.82
PHC3-213ENST00000491258 IGHV4-39P01824 125 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 IFIT2P09913 472 aaKnown RBP3.71□□□□□ -1.82
PHC3-213ENST00000491258 PRSS56P0CW18 603 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 BDKRB2P30411 391 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 GAGE5Q13069 117 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 GAGE6Q13070 117 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 NAA25Q14CX7 972 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 KRT24Q2M2I5 525 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 CCDC38Q502W7 563 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 JMJD6Q6NYC1 403 aaPredicted RBP3.71□□□□□ -1.82
PHC3-213ENST00000491258 TMEM57Q8N5G2 664 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 TMEM190Q8WZ59 177 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 SDCCAG3Q96C92 435 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 PRAM1Q96QH2 718 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 PCYT2Q99447 389 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
PHC3-213ENST00000491258 TRIM15Q9C019 465 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 RPS10P5Q9NQ39 176 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 ALKBH4Q9NXW9 302 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 DNAJC16Q9Y2G8 782 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 RRP7AQ9Y3A4 280 aaKnown RBP3.71□□□□□ -1.82
PHC3-213ENST00000491258 C2CD2Q9Y426 696 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 PLEKHH1Q9ULM0 1364 aa3.71□□□□□ -1.82
PHC3-213ENST00000491258 CCDC144AA2RUR9 1427 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 PTCH1Q13635 1447 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 SPATA31E1Q6ZUB1 1445 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 PRAG1Q86YV5 1406 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 LRP6O75581 1613 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 SH2D7A6NKC9 451 aaPredicted RBP3.7□□□□□ -1.82
PHC3-213ENST00000491258 PSMD14O00487 310 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ARHGEF9O43307 516 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 TK1P04183 234 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 GNB3P16520 340 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 SERPINB3P29508 390 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ADD2P35612 726 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 GRIK3Q13003 919 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ZNF234Q14588 700 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 VEPH1Q14D04 833 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 ZFP69Q49AA0 526 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 SLC45A4Q5BKX6 768 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 FAM53AQ6NSI3 398 aaPredicted RBP3.7□□□□□ -1.82
PHC3-213ENST00000491258 ZNF790Q6PG37 636 aa3.7□□□□□ -1.82
PHC3-213ENST00000491258 P2RY8Q86VZ1 359 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms