RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SNX5Q9Y5X3 404 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ZNF839A8K0R7 811 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 RPN2P04844 631 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CHRNGP07510 517 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SPATA31D3P0C874 917 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PFKLP17858 780 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CDH13P55290 713 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 USP46P62068 366 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 KCTD11Q693B1 232 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ZBTB49Q6ZSB9 765 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SPATA31D4Q6ZUB0 917 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ASRGL1Q7L266 308 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CNTN4Q8IWV2 1026 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MZB1Q8WU39 189 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 UGT2B28Q9BY64 529 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 BLOC1S6Q9UL45 172 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 LOC285556D6RIA3 1793 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 NEDD8-MDP1E9PL57 170 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 INPPL1O15357 1258 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PEX11AO75192 247 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC22A3O75751 556 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC25A14O95258 325 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 ACTR3P61158 418 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PLOD1Q02809 727 aaPredicted RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 FNDC3BQ53EP0 1204 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SULT1C3Q6IMI6 304 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SLC39A5Q6ZMH5 540 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 SERPINA9Q86WD7 417 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 CLEC4FQ8N1N0 589 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 PLD6Q8N2A8 252 aaKnown RBP7.31□□□□□ -1.24
NPHP3-208ENST00000490993 BDH2Q9BUT1 245 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 C9orf16Q9BUW7 83 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 C8orf4Q9NR00 106 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 KIF17Q9P2E2 1029 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 NME7Q9Y5B8 376 aa7.31□□□□□ -1.24
NPHP3-208ENST00000490993 A0A0J9YYE9 177 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 LCHNA4D1U4 455 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CCL22O00626 93 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TP73O15350 636 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 LINC00032P0C843 101 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 MRPS22P82650 360 aaKnown RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 RAB33AQ14088 237 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 KHDC1Q4VXA5 237 aaKnown RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 KDELC1Q6UW63 502 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TMEM132CQ8N3T6 1108 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TTC30BQ8N4P2 665 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CDYL2Q8N8U2 506 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ELMO1Q92556 727 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 INSL6Q9Y581 213 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CCL16O15467 120 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 GABBR2O75899 941 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 PENKP01210 267 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 SLC35E2BP0CK96 405 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 IFNA8P32881 189 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 NSG1P42857 185 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ATP4BP51164 291 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 PFKPQ01813 784 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 FAM182AQ5T1J6 154 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 PLPP4Q5VZY2 271 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 FBXL19Q6PCT2 694 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 RHEBL1Q8TAI7 183 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 KIAA1191Q96A73 305 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TCF25Q9BQ70 676 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 OSBPL6Q9BZF3 934 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 SAGE1Q9NXZ1 904 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 BTRCQ9Y297 605 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TNFRSF10BO14763 440 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 DNAJA2O60884 412 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ALBP02768 609 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ASLP04424 464 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 FAM58BPP0C7Q3 252 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 NKX3-2P78367 333 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CYTH1Q15438 398 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 RBM20Q5T481 1227 aaKnown RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TMTC4Q5T4D3 741 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CGB2Q6NT52 195 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 PROSER1Q86XN7 944 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ENDOVQ8N8Q3 282 aaKnown RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 ADCY4Q8NFM4 1077 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 GPR150Q8NGU9 434 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 GRIN3AQ8TCU5 1115 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 WFIKKN2Q8TEU8 576 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 FAM120BQ96EK7 910 aaKnown RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 VPS50Q96JG6 964 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 CNBD2Q96M20 576 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 TUBGCP5Q96RT8 1024 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 FAM192AQ9GZU8 254 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 AHSPQ9NZD4 102 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 KLQ9UEF7 1012 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 C1QTNF3-AMACRE9PGA6 284 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 STX16-NPEPL1H3BU86 382 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 UBXN8O00124 270 aa7.3□□□□□ -1.24
NPHP3-208ENST00000490993 KPNA3O00505 521 aaPredicted RBP7.3□□□□□ -1.24
NPHP3-208ENST00000490993 STX16O14662 325 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms