RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 OR13C4Q8NGS5 318 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 OR13J1Q8NGT2 312 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 ZNF398Q8TD17 642 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 HEXDCQ8WVB3 486 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 TCEAL3Q969E4 200 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 ULK4Q96C45 1275 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 SCARF2Q96GP6 870 aaPredicted RBP15.72■□□□□ 0.11
TRA2A-208ENST00000490942 DNAJC1Q96KC8 554 aaKnown RBP15.72■□□□□ 0.11
TRA2A-208ENST00000490942 AGAP2Q99490 1192 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 LRRC1Q9BTT6 524 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
TRA2A-208ENST00000490942 FKBPLQ9UIM3 349 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 SNX24Q9Y343 169 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 MYO15AQ9UKN7 3530 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 KNL1Q8NG31 2342 aa15.72■□□□□ 0.11
TRA2A-208ENST00000490942 SCN8AQ9UQD0 1980 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 H3BM21 787 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 GAPDHSO14556 408 aaPredicted RBP15.71■□□□□ 0.11
TRA2A-208ENST00000490942 VEGFDO43915 354 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 CCT8P50990 548 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 ARL4CP56559 192 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 HNRNPKP61978 463 aaKnown RBP eCLIP15.71■□□□□ 0.112e-9■□□□□ 9.7
TRA2A-208ENST00000490942 NFATC2Q13469 925 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 PEX6Q13608 980 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SF3A2Q15428 464 aaKnown RBP15.71■□□□□ 0.11
TRA2A-208ENST00000490942 CHRNA6Q15825 494 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 CCDC6Q16204 474 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 HIF1AQ16665 826 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 ATP13A5Q4VNC0 1218 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 LDLRAP1Q5SW96 308 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 LAYNQ6UX15 382 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 FAM151BQ6UXP7 276 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 TMEM135Q86UB9 458 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 MINDY1Q8N5J2 469 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 NOA1Q8NC60 698 aaKnown RBP15.71■□□□□ 0.11
TRA2A-208ENST00000490942 DDHD1Q8NEL9 900 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SCG3Q8WXD2 468 aaKnown RBP15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 EDEM2Q9BV94 578 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 CARD6Q9BX69 1037 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 LGR4Q9BXB1 951 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 TRIM31Q9BZY9 425 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 ZCCHC2Q9C0B9 1178 aaKnown RBP15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SMOC1Q9H4F8 434 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 GAREM1Q9H706 876 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 TRIM39Q9HCM9 518 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 CHRAC1Q9NRG0 131 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SYBUQ9NX95 663 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SAMD15Q9P1V8 674 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 SLC30A1Q9Y6M5 507 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 DMDP11532 3685 aa15.71■□□□□ 0.11
TRA2A-208ENST00000490942 USP34Q70CQ2 3546 aa15.71■□□□□ 0.1
TRA2A-208ENST00000490942 ZNF106Q9H2Y7 1883 aaKnown RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 PTPRZ1P23471 2315 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 TRBV5-4A0A0C4DH59 114 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 GOLGA8CPA6NN73 597 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 E7ESA3 106 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 GOLGA8MH3BSY2 632 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 EIF3HO15372 352 aaKnown RBP eCLIP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 BUD23O43709 281 aaKnown RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 AVILO75366 819 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 SLC25A14O95258 325 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 RASGRP1O95267 797 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 TTC4O95801 387 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 IVLP07476 585 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 PAMP19021 973 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 MC4RP32245 332 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 PPARDQ03181 441 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 CACNG1Q06432 222 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 EIF2B5Q13144 721 aaKnown RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 PTPRCAPQ14761 206 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 SUZ12Q15022 739 aaKnown RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 AASDHQ4L235 1098 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 CCDC38Q502W7 563 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 TPRG1LQ5T0D9 272 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 KIAA0930Q6ICG6 404 aaPredicted RBP15.7■□□□□ 0.1
TRA2A-208ENST00000490942 AFTPHQ6ULP2 937 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 CERS6Q6ZMG9 384 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 DBX2Q6ZNG2 339 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 MPP5Q8N3R9 675 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 ART4Q93070 314 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 ASB8Q9H765 288 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 FAM114A2Q9NRY5 505 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 GRHL1Q9NZI5 618 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 KLQ9UEF7 1012 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 CSNK1G3Q9Y6M4 447 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 RALGAPA1Q6GYQ0 2036 aa15.7■□□□□ 0.1
TRA2A-208ENST00000490942 TMEM202A6NGA9 273 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 CDX4O14627 284 aaPredicted RBP15.69■□□□□ 0.1
TRA2A-208ENST00000490942 USP1O94782 785 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 CEACAM5P06731 702 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 PGAM1P18669 254 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
TRA2A-208ENST00000490942 HK3P52790 923 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 TERF1P54274 439 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 SRP54P61011 504 aaKnown RBP15.69■□□□□ 0.1
TRA2A-208ENST00000490942 PRAMEP78395 509 aa15.69■□□□□ 0.1
TRA2A-208ENST00000490942 KCTD19Q17RG1 926 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms