RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 RAB3GAP1Q15042 981 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 BEAN1Q3B7T3 259 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZNF618Q5T7W0 954 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 OLFM4Q6UX06 510 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM108Q6UXF1 575 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TPRG1Q6ZUI0 275 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 AMZ2Q86W34 360 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TEX45Q8NA69 505 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TBC1D15Q8TC07 691 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RAPGEF4Q8WZA2 1011 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SUSD6Q92537 303 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TEKT1Q969V4 418 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 GRAMD1AQ96CP6 724 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SIPA1Q96FS4 1042 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 FAM111AQ96PZ2 611 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TRMOQ9BU70 441 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 MSTO1Q9BUK6 570 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 KLC2Q9H0B6 622 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CMAHPQ9Y471 501 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 PARP4Q9UKK3 1724 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 N4BP2Q86UW6 1770 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 FAM237AA0A1B0GTK4 181 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 HEPACAM2A8MVW5 462 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 MYO1CO00159 1063 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SLC33A1O00400 549 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CYP4B1P13584 511 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 DDX5P17844 614 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 GATA3P23771 443 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 IER3P46695 156 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CAMPP49913 170 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TAS2R40P59535 323 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 FAM189BP81408 668 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 COG7P83436 770 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 PSG6Q00889 435 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 RIN1Q13671 783 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CFAP221Q4G0U5 840 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CENPQQ7L2Z9 268 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZCCHC7Q8N3Z6 543 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TRPV1Q8NER1 839 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 OR52M1Q8NGK5 317 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SAP25Q8TEE9 199 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 MARS2Q96GW9 593 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ZBED3Q96IU2 234 aaPredicted RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 TMEM68Q96MH6 324 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 NECTIN4Q96NY8 510 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 GBP5Q96PP8 586 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SPATC1LQ9H0A9 340 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 PCDHB16Q9NRJ7 776 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ABHD10Q9NUJ1 306 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 ABCB8Q9NUT2 735 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SPG21Q9NZD8 308 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 AIPL1Q9NZN9 384 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 KLQ9UEF7 1012 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 DDX25Q9UHL0 483 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 DBR1Q9UK59 544 aaKnown RBP2.97□□□□□ -1.93
UBXN4-208ENST00000490163 SUFUQ9UMX1 484 aa2.97□□□□□ -1.93
UBXN4-208ENST00000490163 CD163L1Q9NR16 1453 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 RNF103-CHMP3A0A140T963 221 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 AGAP5A6NIR3 686 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 RNF103O00237 685 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ATP2A1O14983 1001 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SYN3O14994 580 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MPPED1O15442 326 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 USP12O75317 370 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SLCO2B1O94956 709 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TOP3BO95985 862 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CH25HO95992 272 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 C1RP00736 705 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MMP2P08253 660 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 AHCYP23526 432 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SSR1P43307 286 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CCNA1P78396 465 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TSTA3Q13630 321 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MED22Q15528 200 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ANKRD55Q3KP44 614 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF569Q5MCW4 686 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 GLB1LQ6UWU2 654 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CRELD2Q6UXH1 353 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 PTCHD4Q6ZW05 846 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 TRILQ7L0X0 811 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 UBE3BQ7Z3V4 1068 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 DNAJB7Q7Z6W7 309 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC170Q8IYT3 715 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 SPARTQ8N0X7 666 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 NSUN7Q8NE18 718 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 KCNG4Q8TDN1 519 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 IP6K1Q92551 441 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 KAT2AQ92830 837 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 RFKQ969G6 155 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 ADAM2Q99965 735 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 BTBD10Q9BSF8 475 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 MRPL13Q9BYD1 178 aaKnown RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 FBXO28Q9NVF7 368 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 GPR160Q9UJ42 338 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 LRRC37A3O60309 1634 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 DCCP43146 1447 aa2.96□□□□□ -1.94
UBXN4-208ENST00000490163 COL16A1Q07092 1604 aaPredicted RBP2.96□□□□□ -1.94
UBXN4-208ENST00000490163 A0A1W2PP11 408 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms