RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ZNF23P17027 643 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 HOXC9P31274 260 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 UBA7P41226 1012 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 APOBEC1P41238 236 aaKnown RBP3.59□□□□□ -1.83
HMGN1-218ENST00000490032 C18orf63Q68DL7 685 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 OR7E24Q6IFN5 339 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 CEACAM20Q6UY09 585 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 SRBD1Q8N5C6 995 aaKnown RBP3.59□□□□□ -1.83
HMGN1-218ENST00000490032 OR52I2Q8NH67 350 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 NFKBIDQ8NI38 313 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 SLC38A5Q8WUX1 472 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 HTRA1Q92743 480 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 APBB2Q92870 758 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 RNF125Q96EQ8 232 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 SCLT1Q96NL6 688 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 NR1H4Q96RI1 486 aaPredicted RBP3.59□□□□□ -1.83
HMGN1-218ENST00000490032 EIF2AK1Q9BQI3 630 aaKnown RBP3.59□□□□□ -1.83
HMGN1-218ENST00000490032 EGLN1Q9GZT9 426 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 PRKRIP1Q9H875 184 aaPredicted RBP3.59□□□□□ -1.83
HMGN1-218ENST00000490032 CYP46A1Q9Y6A2 500 aa3.59□□□□□ -1.83
HMGN1-218ENST00000490032 BLOC1S5-TXNDC5H3BN57 136 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 NCAM2O15394 837 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 PCDH7O60245 1069 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 ALDH4A1P30038 563 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 PAFAH1B1P43034 410 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 HSD17B4P51659 736 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 CLDN20P56880 219 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 OLIG2Q13516 323 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 MYLK3Q32MK0 819 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 ZNF876PQ49A33 203 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 FAM69AQ5T7M9 428 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 SLC9C2Q5TAH2 1124 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 INO80CQ6PI98 192 aaPredicted RBP3.58□□□□□ -1.84
HMGN1-218ENST00000490032 GPR180Q86V85 440 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 TRIM58Q8NG06 486 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 IGSF8Q969P0 613 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 SAAL1Q96ER3 474 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 LINGO1Q96FE5 620 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 PCGF1Q9BSM1 259 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 TFB2MQ9H5Q4 396 aaKnown RBP3.58□□□□□ -1.84
HMGN1-218ENST00000490032 ABI3Q9P2A4 366 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 ZNF624Q9P2J8 865 aaPredicted RBP3.58□□□□□ -1.84
HMGN1-218ENST00000490032 HAO1Q9UJM8 370 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 FBXL2Q9UKC9 423 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 INTS6Q9UL03 887 aaKnown RBP3.58□□□□□ -1.84
HMGN1-218ENST00000490032 KLHL20Q9Y2M5 609 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 KDM3AQ9Y4C1 1321 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 KIAA1210Q9ULL0 1709 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 CACNA1FO60840 1977 aa3.58□□□□□ -1.84
HMGN1-218ENST00000490032 FAM237AA0A1B0GTK4 181 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 A0A1B0GU03 582 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 A0A1W2PP11 408 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 EIF3DO15371 548 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 KCNN4O15554 427 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 CTSVO60911 334 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 UGT1A1P22309 533 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 UBA1P22314 1058 aaKnown RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 AHRP35869 848 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 PIP4K2AP48426 406 aaPredicted RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 ARCN1P48444 511 aaKnown RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 EIF3BP55884 814 aaKnown RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 NEXNQ0ZGT2 675 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 CXorf66Q5JRM2 361 aaPredicted RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 WDR38Q5JTN6 314 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 SFMBT2Q5VUG0 894 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 PSPC1Q8WXF1 523 aaKnown RBP3.57□□□□□ -1.84
HMGN1-218ENST00000490032 TM9SF4Q92544 642 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 GTF3C6Q969F1 213 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 ZNF354BQ96LW1 612 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 KIF9Q9HAQ2 790 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 RRN3Q9NYV6 651 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
HMGN1-218ENST00000490032 ANTXRLA6NF34 631 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 M0QZ24 198 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 SNAP23O00161 211 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 HS3ST1O14792 307 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ZNF182P17025 639 aaPredicted RBP3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ABCD3P28288 659 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 TAF6P49848 677 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 PLIN5Q00G26 463 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 MAD2L1Q13257 205 aaPredicted RBP3.56□□□□□ -1.84
HMGN1-218ENST00000490032 KRTCAP3Q53RY4 240 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 LCN10Q6JVE6 187 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 PAPD4Q6PIY7 484 aaKnown RBP3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ATF7IPQ6VMQ6 1270 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 PLEKHM3Q6ZWE6 761 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ATG9AQ7Z3C6 839 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 APLFQ8IW19 511 aaPredicted RBP3.56□□□□□ -1.84
HMGN1-218ENST00000490032 MAP7D3Q8IWC1 876 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 CCDC13Q8IYE1 715 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ZNF485Q8NCK3 441 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 ST8SIA4Q92187 359 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 RRNAD1Q96FB5 475 aaKnown RBP3.56□□□□□ -1.84
HMGN1-218ENST00000490032 HARBI1Q96MB7 349 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 USP44Q9H0E7 712 aa3.56□□□□□ -1.84
HMGN1-218ENST00000490032 SLC25A18Q9H1K4 315 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms